RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 VPS4BO75351 444 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 S1PR1P21453 382 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 MPIP34949 423 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 TRHRP34981 398 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 SOX18P35713 384 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 HPCAL1P37235 193 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 NCBP2P52298 156 aaKnown RBP eCLIP19.64■□□□□ 0.738e-7■■■□□ 17.1
TSPAN4-206ENST00000397408 MLLT10P55197 1068 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 TLE1Q04724 770 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 PDE7AQ13946 482 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 EXOSC7Q15024 291 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 SMU1Q2TAY7 513 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 PRR30Q53SZ7 412 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF385BQ569K4 471 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF628Q5EBL2 1059 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 WDR75Q8IWA0 830 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF615Q8N8J6 731 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 MDS2Q8NDY4 140 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 OR7G1Q8NGA0 311 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 KAT2AQ92830 837 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 CTHRC1Q96CG8 243 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 RASL10BQ96S79 203 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 ASIC5Q9NY37 505 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 LRFN1Q9P244 771 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF639Q9UID6 485 aa19.64■□□□□ 0.73
TSPAN4-206ENST00000397408 NBASA2RRP1 2371 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 TRPC5OSA6NMA1 111 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 CDK2AP1O14519 115 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 PDPK1O15530 556 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 TBX19O60806 448 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 PRAMEF2O60811 474 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 CBX7O95931 251 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 G6PDP11413 515 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 CYB561P49447 251 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 HLCSP50747 726 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 TRMT12Q53H54 448 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 HSP90B2PQ58FF3 399 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 SPINK14Q6IE38 97 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 PIWIL2Q8TC59 973 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 ASB15Q8WXK1 588 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 C7orf26Q96N11 449 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 TRIM4Q9C037 500 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 SLCO1B3Q9NPD5 702 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 SH3BP4Q9P0V3 963 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 BCAP29Q9UHQ4 241 aa19.63■□□□□ 0.73
TSPAN4-206ENST00000397408 SCAMP2O15127 329 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 NEURL1O76050 574 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 LBPP18428 481 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 DUSP8Q13202 625 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF766Q5HY98 468 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 R3HCC1LQ7Z5L2 792 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 HORMAD2Q8N7B1 307 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 SIMC1Q8NDZ2 872 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 OR52R1Q8NGF1 315 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 C16orf52Q8NHV5 167 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 CKAP2Q8WWK9 683 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 CIDECQ96AQ7 238 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 MTERF3Q96E29 417 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 AMDHD1Q96NU7 426 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 HES7Q9BYE0 225 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 GLIPR2Q9H4G4 154 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 TRIM45Q9H8W5 580 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 ANKRA2Q9H9E1 313 aa19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 PRRC2CQ9Y520 2896 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-206ENST00000397408 GOLGA8QA0A0J9YX86 632 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 C2orf92A0A1B0GVN3 265 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 GOLGA8OA6NCC3 632 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 A8MVJ9 347 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 GOLGA8NF8WBI6 632 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF354AO60765 605 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 SLC25A12O75746 678 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 OR6B1O95007 311 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 EPHA3P29320 983 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 RPL3P39023 403 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 SOX3P41225 446 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 DIO3P55073 304 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 INPP5JQ15735 1006 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 MPEG1Q2M385 716 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 HLA-DQA1Q5Y7H0 255 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 LARP4Q71RC2 724 aaKnown RBP eCLIP19.61■□□□□ 0.738e-7■■■■■ 32.5
TSPAN4-206ENST00000397408 MAVSQ7Z434 540 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 LRRC34Q8IZ02 419 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 CYP4Z2PQ8N1L4 340 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 CISD2Q8N5K1 135 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 KRTCAP2Q8N6L1 136 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 OR7A2PQ8NGA2 310 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 SLC22A8Q8TCC7 542 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 CPT1CQ8TCG5 803 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 C5orf34Q96MH7 638 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 WDR55Q9H6Y2 383 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 KLHL1Q9NR64 748 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 HPF1Q9NWY4 346 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 MAP10Q9P2G4 905 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 ATP6V1HQ9UI12 483 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 DTX4Q9Y2E6 619 aa19.61■□□□□ 0.73
TSPAN4-206ENST00000397408 CD46P15529 392 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 DDX5P17844 614 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 GPX3P22352 226 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 PIGGQ5H8A4 983 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 OGFOD2Q6N063 350 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms