RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TRPM8Q7Z2W7 1104 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 NFAM1Q8NET5 270 aaPredicted RBP22■■□□□ 1.11
TSPAN4-203ENST00000397397 OR7G2Q8NG99 324 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 SLC2A12Q8TD20 617 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 GTF2H4Q92759 462 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 CMTM5Q96DZ9 223 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 ELP4Q96EB1 424 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 SENP5Q96HI0 755 aaPredicted RBP22■■□□□ 1.11
TSPAN4-203ENST00000397397 CXorf36Q9H7Y0 433 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 ZNF160Q9HCG1 818 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 SERHLQ9NQF3 203 aa22■■□□□ 1.11
TSPAN4-203ENST00000397397 SIRT3Q9NTG7 399 aaPredicted RBP22■■□□□ 1.11
TSPAN4-203ENST00000397397 PRDX6P30041 224 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 SOAT1P35610 550 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 SOX18P35713 384 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 CDKN2CP42773 168 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 CDC20Q12834 499 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 CRTC2Q53ET0 693 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 AMER2Q8N7J2 671 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 B3GNT7Q8NFL0 401 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 PSMA8Q8TAA3 256 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 THAP4Q8WY91 577 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 CTHRC1Q96CG8 243 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 FBXL20Q96IG2 436 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 IMMP1LQ96LU5 166 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 ZNF639Q9UID6 485 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 ERVK-11Q9UQG0 969 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 MAN2B2Q9Y2E5 1009 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 APC2O95996 2303 aa21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 NUP214P35658 2090 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-203ENST00000397397 BBIP1A8MTZ0 92 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 PLOD2O00469 737 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 FBP2O00757 339 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 GSNP06396 782 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 SSTR4P31391 388 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 TRPC1P48995 793 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 TLE3Q04726 772 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 EXOSC7Q15024 291 aaKnown RBP21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 EXT1Q16394 746 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 BTBD16Q32M84 506 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 SPDYE7PQ495Y7 208 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 REP15Q6BDI9 236 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 DNAJC14Q6Y2X3 702 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 ZNF621Q6ZSS3 439 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 RETREG3Q86VR2 466 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 ZNF321PQ8N8H1 164 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 OR1N1Q8NGS0 311 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 GOT1L1Q8NHS2 421 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 ZNF721Q8TF20 911 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 NCLNQ969V3 563 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 NPAS2Q99743 824 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 ANKRA2Q9H9E1 313 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 C3orf14Q9HBI5 128 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 ARL8BQ9NVJ2 186 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 DDX18Q9NVP1 670 aaKnown RBP21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 PTGFRNQ9P2B2 879 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 COPS7AQ9UBW8 275 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 BCAP29Q9UHQ4 241 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 VPS4AQ9UN37 437 aa21.98■■□□□ 1.11
TSPAN4-203ENST00000397397 A0A087WV62 115 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 MASP2O00187 686 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 PLOD3O60568 738 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 ANP32DO95626 131 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 S1PR1P21453 382 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 FUT7Q11130 342 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 FHL5Q5TD97 284 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 SZRD1Q7Z422 152 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 OR7G1Q8NGA0 311 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 NUDT9Q9BW91 350 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 TRIM4Q9C037 500 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 PPIEQ9UNP9 301 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 POLHQ9Y253 713 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 A0A096LPI6 279 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 UPK1AO00322 258 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 MRASO14807 208 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 EMC8O43402 210 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 KCNH1O95259 989 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 CBX7O95931 251 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 IGKV3-11P04433 115 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 IFI6P09912 130 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 CCT3P49368 545 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 GPR143P51810 404 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 KRT72Q14CN4 511 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 COQ5Q5HYK3 327 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 PLAG1Q6DJT9 500 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 TMEM64Q6YI46 380 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 RNF111Q6ZNA4 994 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 OR2L13Q8N349 312 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 DPP10Q8N608 796 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 TRIML2Q8N7C3 387 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 SIMC1Q8NDZ2 872 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 OR52R1Q8NGF1 315 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 OR5AK3PQ8NH89 298 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 M1APQ8TC57 530 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 RCN3Q96D15 328 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 FAM120BQ96EK7 910 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 VMP1Q96GC9 406 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 FER1L6-AS2Q96M78 137 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 PAIP1Q9H074 479 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 OR10A5Q9H207 317 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms