RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 OR5T1Q8NG75 326 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 OR6Q1Q8NGQ2 317 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 RPLP0P6Q8NHW5 317 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 ZNF689Q96CS4 500 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 TMEM80Q96HE8 168 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 OR5B2Q96R09 309 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 ZNF649Q9BS31 505 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 OR51B6Q9H340 312 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 PRMT8Q9NR22 394 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 COQ4Q9Y3A0 265 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 ARID1BQ8NFD5 2236 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 REREQ9P2R6 1566 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 NSG1A0A0A6YYJ2 146 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 BTBD17A6NE02 478 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 AGAP5A6NIR3 686 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 F5H0A9 414 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 PRAMEF26H0Y7S4 382 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 SULT2B1O00204 365 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 DLGAP1O14490 977 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 ZNF780AO75290 641 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 HTR3BO95264 441 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 VNN1O95497 513 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 XRCC1P18887 633 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 TCN2P20062 427 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 RRADP55042 308 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 RING1Q06587 406 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 GALNT2Q10471 571 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 UGT3A2Q3SY77 523 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 MANEAQ5SRI9 462 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 ZNF648Q5T619 568 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 TMEM53Q6P2H8 277 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 SLC2A12Q8TD20 617 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 FCAMRQ8WWV6 532 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 FAM46BQ96A09 425 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 SSX3Q99909 188 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 ZFYVE21Q9BQ24 234 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 RXFP3Q9NSD7 469 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 TBCCD1Q9NVR7 557 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 TMEM9Q9P0T7 183 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 SLC17A6Q9P2U8 582 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 A6NHS1 94 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 UNC119BA6NIH7 251 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 HOXD8P13378 290 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 POU3F2P20265 443 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 ETV5P41161 510 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 OR1E2P47887 323 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 FNTBP49356 437 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 LUMP51884 338 aaPredicted RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 HK3P52790 923 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 LGALS4P56470 323 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 TBPL1P62380 186 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 EEF1A1P68104 462 aaKnown RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 NR0B2Q15466 257 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 ACSBG2Q5FVE4 666 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 RNASE10Q5GAN6 216 aaKnown RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 C6orf141Q5SZD1 244 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 OLFML1Q6UWY5 402 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 TMEM107Q6UX40 140 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 LILRB2Q8N423 598 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 SLC35F5Q8WV83 523 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 RLN3Q8WXF3 142 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 LRCH3Q96II8 777 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 SECISBP2Q96T21 854 aaKnown RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 MGAT4CQ9UBM8 478 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 SARDHQ9UL12 918 aa6.87□□□□□ -1.31
UPF2-203ENST00000397053 REXO2Q9Y3B8 237 aaKnown RBP6.87□□□□□ -1.31
UPF2-203ENST00000397053 UNC13BO14795 1591 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 A0A1W2PP18 115 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 OR6C70A6NIJ9 312 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SLC16A5O15375 505 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 XPNPEP2O43895 674 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SERPINE2P07093 398 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CHRM4P08173 479 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 DRD2P14416 443 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 AOC1P19801 751 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CD72P21854 359 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TIA1P31483 386 aaKnown RBP eCLIP6.86□□□□□ -1.31
UPF2-203ENST00000397053 SOX3P41225 446 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 S100A12P80511 92 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ZNF33AQ06730 810 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TDGQ13569 410 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 NKPD1Q17RQ9 610 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 VHLLQ6RSH7 139 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SERINC5Q86VE9 423 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 COMTD1Q86VU5 262 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 PPP1R3BQ86XI6 285 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 IQCKQ8N0W5 287 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SAMD12Q8N8I0 201 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 OR13C3Q8NGS6 347 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 AMDHD1Q96NU7 426 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ITPAQ9BY32 194 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ENKD1Q9H0I2 346 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CWH43Q9H720 699 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 PLEK2Q9NYT0 353 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SEC14L4Q9UDX3 406 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CAMK2AQ9UQM7 478 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 VDAC3Q9Y277 283 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 SLIT1O75093 1534 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms