RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 C11orf16Q9NQ32 467 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 CCDC59Q9P031 241 aaKnown RBP14.5□□□□□ -0.09
CPSF7-202ENST00000394888 TMEM131Q92545 1883 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 AGAP5A6NIR3 686 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 C5AR1P21730 350 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 CRYBB2P43320 205 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 PLAURQ03405 335 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 SLC25A30Q5SVS4 291 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 RNLSQ5VYX0 342 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 TMEM64Q6YI46 380 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 EGFL6Q8IUX8 553 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 HDDC3Q8N4P3 179 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 SLC38A1Q9H2H9 487 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 DYRK4Q9NR20 520 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 PCDHGA4Q9Y5G9 962 aa14.5□□□□□ -0.09
CPSF7-202ENST00000394888 EML5Q05BV3 1969 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 A6NCN8 305 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 PROM1O43490 865 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 SLC35G4P0C7Q5 338 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 F3P13726 295 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 HIST1H1TP22492 207 aaPredicted RBP14.49□□□□□ -0.09
CPSF7-202ENST00000394888 TP53BP2Q13625 1128 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 RPE65Q16518 533 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 TMEM196Q5HYL7 178 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 PERM1Q5SV97 790 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 ACSM5Q6NUN0 579 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 PAGE2Q7Z2X7 111 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 IQCF1Q8N6M8 205 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 ACOT4Q8N9L9 421 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 VANGL1Q8TAA9 524 aaPredicted RBP14.49□□□□□ -0.09
CPSF7-202ENST00000394888 FERD3LQ96RJ6 166 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 A3GALT2U3KPV4 340 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 SCAMP1O15126 338 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 DNTTP04053 509 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 CERS1P27544 350 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 ADPRHP54922 357 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 FAM46CQ5VWP2 391 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 ZNF367Q7RTV3 350 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 MEX3DQ86XN8 651 aaKnown RBP14.49□□□□□ -0.09
CPSF7-202ENST00000394888 ZHX1-C8orf76Q96EF9 292 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 PBX4Q9BYU1 374 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 UCK2Q9BZX2 261 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 LIPT1Q9Y234 373 aa14.49□□□□□ -0.09
CPSF7-202ENST00000394888 LRRTM2O43300 516 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 KCNK2O95069 426 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 DBTP11182 482 aaKnown RBP14.48□□□□□ -0.09
CPSF7-202ENST00000394888 TRHRP34981 398 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-202ENST00000394888 TFF2Q03403 129 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 C1orf94Q6P1W5 598 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 PLEKHG7Q6ZR37 379 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 P3H2Q8IVL5 708 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 FAM46DQ8NEK8 389 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 S100ZQ8WXG8 99 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 ZBED6CLQ96FA7 236 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-202ENST00000394888 IL4I1Q96RQ9 567 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 AHSPQ9NZD4 102 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 CENPVL1A0A0U1RR11 272 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 ISM1B1AKI9 464 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 M0R3G1 203 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 FAAHO00519 579 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 ZSCAN9O15535 394 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-202ENST00000394888 OXSR1O95747 527 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-202ENST00000394888 DRD2P14416 443 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 PPP5CP53041 499 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 ZNF404Q494X3 552 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 C6orf132Q5T0Z8 1188 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 STEAP3Q658P3 488 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 SLC48A1Q6P1K1 146 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 DEPDC4Q8N2C3 294 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 NATD1Q8N6N6 113 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 GABRG3Q99928 467 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 NTMQ9P121 344 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 TBC1D29Q9UFV1 150 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 KLF4O43474 513 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 IFNA14P01570 189 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 HMGN2P05204 90 aaKnown RBP14.48□□□□□ -0.09
CPSF7-202ENST00000394888 SMIM10L1P0DMW3 83 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 TUBA1BP68363 451 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 ALDH6A1Q02252 535 aaKnown RBP14.48□□□□□ -0.09
CPSF7-202ENST00000394888 SLAMF1Q13291 335 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 TUBA1AQ71U36 451 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 IL17RCQ8NAC3 791 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 SMIM10Q96HG1 83 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 ARHGDIGQ99819 225 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 DNAJC27Q9NZQ0 273 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 KCMF1Q9P0J7 381 aa14.48□□□□□ -0.09
CPSF7-202ENST00000394888 ZNF624Q9P2J8 865 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-202ENST00000394888 UPK1BO75841 260 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 SOX3P41225 446 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 ZNF91Q05481 1191 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 FOXD4Q12950 439 aaPredicted RBP14.47□□□□□ -0.09
CPSF7-202ENST00000394888 ENTPD8Q5MY95 495 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 MFSD4BQ5TF39 518 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 FAM111BQ6SJ93 734 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 TMEM184AQ6ZMB5 413 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 PAQR7Q86WK9 346 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 SLC44A2Q8IWA5 706 aaPredicted RBP14.47□□□□□ -0.09
CPSF7-202ENST00000394888 POGLUT1Q8NBL1 392 aa14.47□□□□□ -0.09
CPSF7-202ENST00000394888 CAB39Q9Y376 341 aaPredicted RBP14.47□□□□□ -0.09
CPSF7-202ENST00000394888 POM121BA6NF01 834 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms