RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 OR8K3Q8NH51 312 aa17.9■□□□□ 0.46
HOXC6-202ENST00000394331 ALG14Q96F25 216 aa17.9■□□□□ 0.46
HOXC6-202ENST00000394331 BOCQ9BWV1 1114 aa17.9■□□□□ 0.46
HOXC6-202ENST00000394331 SAV1Q9H4B6 383 aaPredicted RBP17.9■□□□□ 0.46
HOXC6-202ENST00000394331 ELOVL2Q9NXB9 296 aa17.9■□□□□ 0.46
HOXC6-202ENST00000394331 KCTD5Q9NXV2 234 aa17.9■□□□□ 0.46
HOXC6-202ENST00000394331 POMT2Q9UKY4 750 aa17.9■□□□□ 0.46
HOXC6-202ENST00000394331 DLGAP4Q9Y2H0 992 aa17.9■□□□□ 0.46
HOXC6-202ENST00000394331 GAPDHSO14556 408 aaPredicted RBP17.89■□□□□ 0.46
HOXC6-202ENST00000394331 SMAD6O43541 496 aaKnown RBP17.89■□□□□ 0.46
HOXC6-202ENST00000394331 SSTR2P30874 369 aa17.89■□□□□ 0.46
HOXC6-202ENST00000394331 DHODHQ02127 395 aa17.89■□□□□ 0.46
HOXC6-202ENST00000394331 MAP4K2Q12851 820 aa17.89■□□□□ 0.46
HOXC6-202ENST00000394331 ZBTB2Q8N680 514 aa17.89■□□□□ 0.46
HOXC6-202ENST00000394331 UBTD2Q8WUN7 234 aa17.89■□□□□ 0.46
HOXC6-202ENST00000394331 TM6SF2Q9BZW4 377 aa17.89■□□□□ 0.46
HOXC6-202ENST00000394331 IL26Q9NPH9 171 aa17.89■□□□□ 0.46
HOXC6-202ENST00000394331 HCN3Q9P1Z3 774 aa17.89■□□□□ 0.46
HOXC6-202ENST00000394331 TRBV5-4A0A0C4DH59 114 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 TRBC1P01850 177 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 PEPDP12955 493 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 CXCL3P19876 107 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 BTCP35070 178 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 CDH12P55289 794 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 TPBGQ13641 420 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 HTR3DQ70Z44 454 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 SLAIN1Q8ND83 568 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 TM9SF4Q92544 642 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 H2AFJQ9BTM1 129 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 APOL5Q9BWW9 433 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 SLC19A3Q9BZV2 496 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 EMC3Q9P0I2 261 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 CRLS1Q9UJA2 301 aa17.89■□□□□ 0.45
HOXC6-202ENST00000394331 PQLC2LA1A4F0 135 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 DNASE2O00115 360 aaPredicted RBP17.88■□□□□ 0.45
HOXC6-202ENST00000394331 H2AFB1P0C5Y9 115 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 H2AFB2P0C5Z0 115 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 ACRV1P26436 265 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 TRIM23P36406 574 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 GRM7Q14831 915 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 IFI44LQ53G44 452 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 DGKKQ5KSL6 1271 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 MPP7Q5T2T1 576 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 MACC1Q6ZN28 852 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 LAPTM4BQ86VI4 370 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 PXYLP1Q8TE99 480 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 PANX1Q96RD7 426 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 MS4A7Q9GZW8 240 aaPredicted RBP17.88■□□□□ 0.45
HOXC6-202ENST00000394331 COA4Q9NYJ1 87 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 COPZ2Q9P299 210 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 PFDN2Q9UHV9 154 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 TLR4O00206 839 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 GPR171O14626 319 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 FFAR3O14843 346 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 GPR42O15529 346 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 PPIBP23284 216 aaKnown RBP17.88■□□□□ 0.45
HOXC6-202ENST00000394331 OCLNQ16625 522 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 TCTN1Q2MV58 587 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 GPRC6AQ5T6X5 926 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 USP30Q70CQ3 517 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 CLDN19Q8N6F1 224 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 OR9Q2Q8NGE9 314 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 SPPL2AQ8TCT8 520 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 LKAAEAR1Q8TD35 194 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 IGSF21Q96ID5 467 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 RDH14Q9HBH5 336 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 BRD7Q9NPI1 651 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 MALT1Q9UDY8 824 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 HCN2Q9UL51 889 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 EXO1Q9UQ84 846 aaKnown RBP17.88■□□□□ 0.45
HOXC6-202ENST00000394331 K7ERQ8 282 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 AGRPO00253 132 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 PRMT3O60678 531 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 SOCS5O75159 536 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 B3GALT4O96024 378 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 CALCRP30988 508 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 GABRA5P31644 462 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 SRSF11Q05519 484 aaKnown RBP17.88■□□□□ 0.45
HOXC6-202ENST00000394331 TSC22D1Q15714 1073 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 PABPC1L2AQ5JQF8 200 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 DPH2Q9BQC3 489 aaPredicted RBP17.88■□□□□ 0.45
HOXC6-202ENST00000394331 VN1R3Q9BXE9 311 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 ACPTQ9BZG2 426 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 DPAGT1Q9H3H5 408 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 HMX1Q9NP08 348 aaPredicted RBP17.88■□□□□ 0.45
HOXC6-202ENST00000394331 SLC35C2Q9NQQ7 365 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 PRSS21Q9Y6M0 314 aa17.88■□□□□ 0.45
HOXC6-202ENST00000394331 AIPO00170 330 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 SELENOFO60613 162 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 CSNK1DP48730 415 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 PIK3CGP48736 1102 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 CSTF1Q05048 431 aaKnown RBP17.87■□□□□ 0.45
HOXC6-202ENST00000394331 LRRC32Q14392 662 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 RASSF6Q6ZTQ3 369 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 DNAJB7Q7Z6W7 309 aaPredicted RBP17.87■□□□□ 0.45
HOXC6-202ENST00000394331 CBARPQ8N350 705 aaPredicted RBP17.87■□□□□ 0.45
HOXC6-202ENST00000394331 BVESQ8NE79 360 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 OR6K2Q8NGY2 324 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 FOXJ1Q92949 421 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 FAM120CQ9NX05 1096 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms