RNA–Protein interactions for RNA: ENST00000385041.1

MIR548A1-201, Transcript of microRNA 548a-1, humanhuman

BASIC

Gene MIR548A1, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A1-201ENST00000385041 CRKLP46109 303 aaKnown RBP-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 IER3P46695 156 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 OR1D4P47884 311 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 TRAPPC10P48553 1259 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 UBXN2AP68543 259 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 NOP14P78316 857 aaKnown RBP-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 OC90Q02509 493 aaPredicted RBP-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 DPYSL3Q14195 570 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 UBE2SQ16763 222 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 CCDC57Q2TAC2 916 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 MAP9Q49MG5 647 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 SUSD4Q5VX71 490 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 ZNF730Q6ZMV8 503 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 OTOAQ7RTW8 1153 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 SLFN11Q7Z7L1 901 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 GRK7Q8WTQ7 553 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 TCP11Q8WWU5 503 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 CEP170P1Q96L14 293 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 TNMDQ9H2S6 317 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 DCLRE1BQ9H816 532 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 ZNF430Q9H8G1 570 aaPredicted RBP-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 NOL11Q9H8H0 719 aaKnown RBP-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 PIGVQ9NUD9 493 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 CD274Q9NZQ7 290 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 DDX25Q9UHL0 483 aaKnown RBP-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 SLC24A2Q9UI40 661 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 TRMT6Q9UJA5 497 aaKnown RBP-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 FZR1Q9UM11 496 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 NCKAP1Q9Y2A7 1128 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 RNF115Q9Y4L5 304 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 MAST4O15021 2626 aa-0.32□□□□□ -2.46
MIR548A1-201ENST00000385041 ANKRD17O75179 2603 aaKnown RBP-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 FAT4Q6V0I7 4981 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 SHANK1Q9Y566 2161 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 C2orf92A0A1B0GVN3 265 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 VGLL3A8MV65 326 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 ZNF732B4DXR9 585 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 TMEM150CB9EJG8 249 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 E5RGE8 158 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 NPIPA3F8WFD2 350 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 TBL1XO60907 577 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 ZBED4O75132 1171 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 LYNP07948 512 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 UQCRFS1P1P0C7P4 283 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 LAMP2P13473 410 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 HOXA9P31269 272 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 OTX2P32243 289 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 TUBP50607 506 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 OTUD4Q01804 1114 aaKnown RBP-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 IL10RBQ08334 325 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 SNAPC1Q16533 368 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 APOOLQ6UXV4 268 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 FRA10AC1Q70Z53 315 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 PXKQ7Z7A4 578 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 TTC30BQ8N4P2 665 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 ICA1LQ8NDH6 482 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 TSPAN14Q8NG11 270 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 OR2AP1Q8NGE2 309 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 OR13C5Q8NGS8 318 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 TRAF3IP1Q8TDR0 691 aaPredicted RBP-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 P2RX5Q93086 422 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 SLC35C1Q96A29 364 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 FGGYQ96C11 551 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 RRP36Q96EU6 259 aaKnown RBP-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 C5orf30Q96GV9 206 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 PSMD1Q99460 953 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 PAFAH2Q99487 392 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 NPAS2Q99743 824 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 FUT8Q9BYC5 575 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 ZNF350Q9GZX5 532 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 KAT8Q9H7Z6 458 aaKnown RBP-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 TBC1D7Q9P0N9 293 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 EIF3KQ9UBQ5 218 aaKnown RBP-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 RAB23Q9ULC3 237 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 TP53TG5Q9Y2B4 290 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 NSG2Q9Y328 171 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 ZNF337Q9Y3M9 751 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 NAV2Q8IVL1 2488 aa-0.33□□□□□ -2.46
MIR548A1-201ENST00000385041 IGKV1D-43A0A0B4J1Z2 117 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 PSMB11A5LHX3 300 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 TRIM77I1YAP6 450 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 K7N7A8 449 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 CLDN4O14493 209 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 ALPIP09923 528 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 STAG3L1P0CL83 205 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 EEF1B2P24534 225 aaKnown RBP-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 RPL32P62910 135 aaKnown RBP-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 KLHL30Q0D2K2 578 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 LCP2Q13094 533 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 IL18R1Q13478 541 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 KCTD2Q14681 263 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 NTRK2Q16620 822 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 LACTB2Q53H82 288 aaPredicted RBP-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 UNC50Q53HI1 259 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 TAF3Q5VWG9 929 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 MALRD1Q5VYJ5 2156 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 IKBIPQ70UQ0 350 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 UBALD2Q8IYN6 164 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 FTMTQ8N4E7 242 aa-0.34□□□□□ -2.46
MIR548A1-201ENST00000385041 WDTC1Q8N5D0 677 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms