RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ITGA10O75578 1167 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 IGKV3-11P04433 115 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 GALNSP34059 522 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 CD96P40200 585 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 TNFSF10P50591 281 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 AQP5P55064 265 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 MLLT10P55197 1068 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 SF3A3Q12874 501 aaKnown RBP eCLIP18■□□□□ 0.47
GTF3A-201ENST00000381140 TUBA3CQ13748 450 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 IL23RQ5VWK5 629 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 TUBA3EQ6PEY2 450 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 C9orf40Q8IXQ3 194 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 Q8NA96 180 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 SUN3Q8TAQ9 357 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 ZNF681Q96N22 645 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 TMEM120AQ9BXJ8 343 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 RNF32Q9H0A6 362 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18■□□□□ 0.47
GTF3A-201ENST00000381140 EHD3Q9NZN3 535 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 BCAP29Q9UHQ4 241 aa18■□□□□ 0.47
GTF3A-201ENST00000381140 EXO1Q9UQ84 846 aaKnown RBP18■□□□□ 0.47
GTF3A-201ENST00000381140 WBP11Q9Y2W2 641 aaKnown RBP18■□□□□ 0.47
GTF3A-201ENST00000381140 OR2J2O76002 312 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 ATP1B1P05026 303 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 ASMTP46597 345 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 MRPS35P82673 323 aaKnown RBP17.99■□□□□ 0.47
GTF3A-201ENST00000381140 EXOSC7Q15024 291 aaKnown RBP17.99■□□□□ 0.47
GTF3A-201ENST00000381140 PRICKLE4Q2TBC4 344 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 PRR30Q53SZ7 412 aaPredicted RBP17.99■□□□□ 0.47
GTF3A-201ENST00000381140 ZNF468Q5VIY5 522 aaPredicted RBP17.99■□□□□ 0.47
GTF3A-201ENST00000381140 SLC29A4Q7RTT9 530 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 SAMD14Q8IZD0 417 aaPredicted RBP17.99■□□□□ 0.47
GTF3A-201ENST00000381140 VWA5B2Q8N398 1253 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 TMEM156Q8N614 296 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 OR5L2Q8NGL0 311 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 OR9A2Q8NGT5 310 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 KAT2AQ92830 837 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 PPCDCQ96CD2 204 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 SIGLEC12Q96PQ1 595 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 AKTIPQ9H8T0 292 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 MAT2BQ9NZL9 334 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 MYOTQ9UBF9 498 aa17.99■□□□□ 0.47
GTF3A-201ENST00000381140 EIF3LQ9Y262 564 aaKnown RBP17.99■□□□□ 0.47
GTF3A-201ENST00000381140 TRAV17A0A0B4J275 112 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 TMEM200CA6NKL6 621 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 PYCARD-AS1I3L0S3 204 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 SORBS2O94875 1100 aaKnown RBP17.98■□□□□ 0.47
GTF3A-201ENST00000381140 PCSK2P16519 638 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 NTSP30990 170 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 SSR4P51571 173 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 NCBP2P52298 156 aaKnown RBP eCLIP17.98■□□□□ 0.47
GTF3A-201ENST00000381140 SLC37A1P57057 533 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 TLE1Q04724 770 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 OR1C1Q15619 314 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 EPGNQ6UW88 154 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 FAM9CQ8IZT9 166 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 REEP4Q9H6H4 257 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 KLHL1Q9NR64 748 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 SH3BP4Q9P0V3 963 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 LRFN1Q9P244 771 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 YARS2Q9Y2Z4 477 aaKnown RBP17.98■□□□□ 0.47
GTF3A-201ENST00000381140 NUP214P35658 2090 aaPredicted RBP17.98■□□□□ 0.47
GTF3A-201ENST00000381140 ZNF462Q96JM2 2506 aa17.98■□□□□ 0.47
GTF3A-201ENST00000381140 BSNQ9UPA5 3926 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 GOLGA8QA0A0J9YX86 632 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 GOLGA8OA6NCC3 632 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 TRPC5OSA6NMA1 111 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 GOLGA8NF8WBI6 632 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 PRAMEF2O60811 474 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 CLPSP04118 112 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 MPIP34949 423 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 HPCAL1P37235 193 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 CYB561P49447 251 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 IDH3AP50213 366 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 MAD2L1Q13257 205 aaPredicted RBP17.97■□□□□ 0.47
GTF3A-201ENST00000381140 PTGR1Q14914 329 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 TRMT12Q53H54 448 aaKnown RBP17.97■□□□□ 0.47
GTF3A-201ENST00000381140 HLA-DQA1Q5Y7H0 255 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 SPINK14Q6IE38 97 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 CISD2Q8N5K1 135 aaKnown RBP17.97■□□□□ 0.47
GTF3A-201ENST00000381140 OR8K3Q8NH51 312 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 ASB15Q8WXK1 588 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 CIDECQ96AQ7 238 aaPredicted RBP17.97■□□□□ 0.47
GTF3A-201ENST00000381140 C5orf34Q96MH7 638 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 OR10A5Q9H207 317 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 ANKRA2Q9H9E1 313 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 MEAF6Q9HAF1 191 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 ERVK-11Q9UQG0 969 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 PCDHGA10Q9Y5H3 936 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 SVILO95425 2214 aa17.97■□□□□ 0.47
GTF3A-201ENST00000381140 EXPH5Q8NEV8 1989 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 MYO1GB0I1T2 1018 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 PRPS2P11908 318 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 HLCSP50747 726 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 EMX2Q04743 252 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 MGAT2Q10469 447 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 FUT7Q11130 342 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 MAP4K2Q12851 820 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 ZNF385BQ569K4 471 aa17.96■□□□□ 0.47
GTF3A-201ENST00000381140 ZNF766Q5HY98 468 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms