RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TBX6O95947 436 aaPredicted RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 ADAP00813 363 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 MSL3P1P0C860 447 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 ITGB7P26010 798 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 ETV5P41161 510 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 ETV1P50549 477 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 PNLIPRP1P54315 467 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 E2F2Q14209 437 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 LARS2Q15031 903 aaKnown RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 C9orf50Q5SZB4 431 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 DCST1Q5T197 706 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 OR2G6Q5TZ20 316 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 SHFQ7M4L6 423 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 WFIKKN2Q8TEU8 576 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 RNF31Q96EP0 1072 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 LRIG1Q96JA1 1093 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 F2RL3Q96RI0 385 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 PRRG3Q9BZD7 231 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 RANGRFQ9HD47 186 aaPredicted RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 SEMA3GQ9NS98 782 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 NDUFB11Q9NX14 153 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 NUFIP1Q9UHK0 495 aaKnown RBP15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 STUB1Q9UNE7 303 aa15.39■□□□□ 0.05
NKX3-1-201ENST00000380871 DOCK9Q9BZ29 2069 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 ANHXE9PGG2 379 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 NTN1O95631 604 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 PIPP12273 146 aaPredicted RBP15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 ACP5P13686 325 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 PBX2P40425 430 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 CLCNKAP51800 687 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 PCDH1Q08174 1060 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 ELOAQ14241 798 aaKnown RBP15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 ATAT1Q5SQI0 421 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 SLX4IPQ5VYV7 408 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 CASP12Q6UXS9 341 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 AMZ2Q86W34 360 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 TRIM48Q8IWZ4 208 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 KLHDC8AQ8IYD2 350 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 NANOGP1Q8N7R0 232 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 OR5D16Q8NGK9 328 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 SMARCD2Q92925 531 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 PDXPQ96GD0 296 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 GPA33Q99795 319 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 MAPRE3Q9UPY8 281 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 KCNK6Q9Y257 313 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 TSPAN11A1L157 253 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 HYKKA2RU49 373 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 TP53P04637 393 aaPredicted RBP15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 NDUFA5Q16718 116 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 PRAMEF14Q5SWL7 426 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 PRAMEF13Q5VWM6 474 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 NXPE4Q6UWF7 544 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 GALNT12Q8IXK2 581 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 ETFBKMTQ8IXQ9 262 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 ASB16Q96NS5 453 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 EFCAB11Q9BUY7 163 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 MND1Q9BWT6 205 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 ZDHHC5Q9C0B5 715 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 C11orf54Q9H0W9 315 aaPredicted RBP15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 IMP3Q9NV31 184 aaKnown RBP15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 TXNL4BQ9NX01 149 aaKnown RBP15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 CMAHPQ9Y471 501 aa15.38■□□□□ 0.05
NKX3-1-201ENST00000380871 A0A1W2PP55 124 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 A0A1W2PQL4 384 aaPredicted RBP15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 PLPP1O14494 284 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 UGT2B17O75795 530 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 UQCRC2P22695 453 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 MANFP55145 182 aaKnown RBP15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 SNRPGP62308 76 aaKnown RBP15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 ILKQ13418 452 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 Q5BKY6 102 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 C12orf73Q69YU5 71 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 USP30Q70CQ3 517 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 KRT73Q86Y46 540 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 CAMKK1Q8N5S9 505 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 ZFP41Q8N8Y5 198 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 PPP1R16AQ96I34 528 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 TM9SF2Q99805 663 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 SGPP1Q9BX95 441 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 SERHL2Q9H4I8 314 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 MBNL1Q9NR56 388 aaKnown RBP15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 SEC14L4Q9UDX3 406 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 MALT1Q9UDY8 824 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 PLEKHM1Q9Y4G2 1056 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 PRAMEF27A3QJZ7 478 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 MYL12BO14950 172 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 H1F0P07305 194 aaKnown RBP15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 CD79BP40259 229 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 RUNX1T1Q06455 604 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 SYPL1Q16563 259 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 C2orf27AQ580R0 203 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 YAF2Q8IY57 180 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 LRRC56Q8IYG6 542 aaPredicted RBP15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 EXOSC8Q96B26 276 aaKnown RBP15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 TMEM246Q9BRR3 403 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 PRSS16Q9NQE7 514 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 TOR4AQ9NXH8 423 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 SERGEFQ9UGK8 458 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 PCDHGB2Q9Y5G2 931 aa15.37■□□□□ 0.05
NKX3-1-201ENST00000380871 TRPM6Q9BX84 2022 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms