RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 PRDX3P30048 256 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 CLDN8P56748 225 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 CDC42P60953 191 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 GINS1Q14691 196 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 FAM187BQ17R55 369 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 FAM174BQ3ZCQ3 159 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 B3GNTL1Q67FW5 361 aaPredicted RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 UNQ6494/PRO21346Q6UXR6 183 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 FGD2Q7Z6J4 655 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 POMGNT2Q8NAT1 580 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 GPR26Q8NDV2 337 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 MCPH1Q8NEM0 835 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 MDGA1Q8NFP4 955 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 NLGN2Q8NFZ4 835 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 ATG101Q9BSB4 218 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 NTPCRQ9BSD7 190 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 BRINP2Q9C0B6 783 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 GBA2Q9HCG7 927 aaPredicted RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 TEX10Q9NXF1 929 aaPredicted RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 POLLQ9UGP5 575 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 TMEM218A2RU14 115 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 C9orf170A2RU37 121 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 MARCH11A6NNE9 402 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 OR10H2O60403 315 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 PEPDP12955 493 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 RGS19P49795 217 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 ANXA11P50995 505 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 PURAQ00577 322 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 RBM39Q14498 530 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 FAHD1Q6P587 224 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 CLEC9AQ6UXN8 241 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 ISCA2Q86U28 154 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 PIM3Q86V86 326 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 ANKRD46Q86W74 232 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 SKA3Q8IX90 412 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 SLC5A8Q8N695 610 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 OR2L5Q8NG80 312 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 HASPINQ8TF76 798 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 POLDIP3Q9BY77 421 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 FN3KQ9H479 309 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 NDUFB11Q9NX14 153 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 PSMD3O43242 534 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 NARSO43776 548 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 F2P00734 622 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF44P15621 663 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 MST1P26927 711 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 SLC6A4P31645 630 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 PSMA6P60900 246 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 SEC61A1P61619 476 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 RAC1P63000 192 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 LCP2Q13094 533 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 CDNFQ49AH0 187 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF660Q6AZW8 331 aaPredicted RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 LDB1Q86U70 411 aaPredicted RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 LAPTM4BQ86VI4 370 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 TOMM5Q8N4H5 51 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 MEIOBQ8N635 442 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 C14orf79Q96F83 325 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 GINS4Q9BRT9 223 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 DUSP26Q9BV47 211 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 MTG2Q9H4K7 406 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 IMP3Q9NV31 184 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 METTL1Q9UBP6 276 aaKnown RBP8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 USP21Q9UK80 565 aa8.09□□□□□ -1.11
NHLRC3-201ENST00000379599 I6L893 689 aaPredicted RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 PSMD9O00233 223 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 ARNTLO00327 626 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 MT-ND4P03905 459 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 ATXN1LP0C7T5 689 aaKnown RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 DRD2P14416 443 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 ELK1P19419 428 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 RAB4AP20338 218 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 PTPN3P26045 913 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 ABCD3P28288 659 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 DDTP30046 118 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 AP1S1P61966 158 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 HNRNPKP61978 463 aaKnown RBP eCLIP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 RPS25P62851 125 aaKnown RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 PRR5P85299 388 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 OC90Q02509 493 aaPredicted RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 ELAVL2Q12926 359 aaKnown RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 HECTD2Q5U5R9 776 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 Q6ZTK2 550 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 FAM131BQ86XD5 332 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 NAXDQ8IW45 347 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 C10orf111Q8N326 155 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 GTPBP3Q969Y2 492 aaKnown RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 ESAMQ96AP7 390 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 WDR89Q96FK6 387 aaPredicted RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 MARS2Q96GW9 593 aaKnown RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 SENP5Q96HI0 755 aaPredicted RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 HSH2DQ96JZ2 352 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 SOSTQ9BQB4 213 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 GABARAPL3Q9BY60 117 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 MRPL37Q9BZE1 423 aaKnown RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 METTL9Q9H1A3 318 aa8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 FAM212BQ9NTI7 297 aaPredicted RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 ACSS1Q9NUB1 689 aaPredicted RBP8.08□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC25A37Q9NYZ2 338 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms