RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 DNAJC27Q9NZQ0 273 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 PRODH2Q9UF12 536 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 MMP17Q9ULZ9 603 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 PPIEQ9UNP9 301 aaKnown RBP13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 PCDHGB5Q9Y5G0 923 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 PCP4L1A6NKN8 68 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 NUDT7P0C024 238 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 NDUFV2P19404 249 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 CXCR1P25024 350 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 BMP8BP34820 402 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 MXD1Q05195 221 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 GINS1Q14691 196 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 KLHL22Q53GT1 634 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 BMP8AQ7Z5Y6 402 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 IL17RCQ8NAC3 791 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 OR2L3Q8NG85 312 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 CNIH3Q8TBE1 160 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 MRGPRX3Q96LB0 322 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 TBX5Q99593 518 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 MAGED1Q9Y5V3 778 aaPredicted RBP13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 ENPP4Q9Y6X5 453 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 WDR90Q96KV7 1748 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 AP1G1O43747 822 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 CISD3P0C7P0 127 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 SELENOWP63302 87 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 OC90Q02509 493 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 INAVAQ3KP66 663 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 TCTE1Q5JU00 501 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 PRSS36Q5K4E3 855 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC35F1Q5T1Q4 408 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 TMEM164Q5U3C3 297 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 TMEM236Q5W0B7 351 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 KIAA1211LQ6NV74 962 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 FAM83HQ6ZRV2 1179 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC22A16Q86VW1 577 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 FAM217AQ8IXS0 508 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 CLIP4Q8N3C7 705 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 C7orf57Q8NEG2 295 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 KLHL6Q8WZ60 621 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 RIT1Q92963 219 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 SERINC2Q96SA4 455 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 C19orf43Q9BQ61 176 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 ABCB9Q9NP78 766 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 RPRD1BQ9NQG5 326 aaKnown RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 POT1Q9NUX5 634 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 SH3PXD2BA1X283 911 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC30A4O14863 429 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 MITFO75030 526 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 RCBTB2O95199 551 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 C7P10643 843 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 PSMA3P25788 255 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 GSTM2P28161 218 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC6A12P48065 614 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 NPRL3Q12980 569 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF829Q3KNS6 432 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 KLHL17Q6TDP4 642 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 MCATQ8IVS2 390 aaKnown RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 OR10H5Q8NGA6 315 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 C6orf106Q9H6K1 298 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 PCDHA9Q9Y5H5 950 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 SGK494L7N484 410 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 KLK8O60259 260 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 LDB3O75112 727 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 OR5F1O95221 314 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 CSTAP01040 98 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 MYL9P24844 172 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 AHRP35869 848 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 CDKN2CP42773 168 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 MAZP56270 477 aaKnown RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 BNC1Q01954 994 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 IL18R1Q13478 541 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 HSF5Q4G112 596 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 FGD2Q7Z6J4 655 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 DCP2Q8IU60 420 aaKnown RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 ENKURQ8TC29 256 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 THAP3Q8WTV1 239 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 FCGR1BQ92637 280 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 TBC1D17Q9HA65 648 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 FAM118AQ9NWS6 357 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 TBC1D29Q9UFV1 150 aa13.44□□□□□ -0.26
SHROOM1-203ENST00000378679 PLXNA1Q9UIW2 1896 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 H0YJX3 145 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 VBP1P61758 197 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 PIP5KL1Q5T9C9 394 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 SYCE2Q6PIF2 218 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 OR8J2Q8NGG1 315 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF354BQ96LW1 612 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 C1QTNF2Q9BXJ5 285 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 GORASP2Q9H8Y8 452 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 CHST10O43529 356 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 S100A1P23297 94 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 GPR18Q14330 331 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 NSDHLQ15738 373 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC36A3Q495N2 470 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 C6orf132Q5T0Z8 1188 aa13.43□□□□□ -0.26
SHROOM1-203ENST00000378679 DDI2Q5TDH0 399 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms