RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 UGT3A2Q3SY77 523 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 CD300LGQ6UXG3 332 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 Q6ZPB1 254 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 FAM217AQ8IXS0 508 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 PLA2G15Q8NCC3 412 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 CHST4Q8NCG5 386 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 ZFAND2BQ8WV99 257 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 SPATA9Q9BWV2 254 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 NMNAT1Q9HAN9 279 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 PRSS16Q9NQE7 514 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 ING3Q9NXR8 418 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 LY75O60449 1722 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 TRIP12Q14669 1992 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 ANXA2P2A6NMY6 339 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 HCRTR2O43614 444 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 SOX30O94993 753 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 ANXA2P07355 339 aaKnown RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 PSKH1P11801 424 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 RNH1P13489 461 aaKnown RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 ACSL1P33121 698 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 OC90Q02509 493 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF33BQ06732 778 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 PUM1Q14671 1186 aaKnown RBP eCLIP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 SLC36A4Q6YBV0 504 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 IKBIPQ70UQ0 350 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 GPR149Q86SP6 731 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 MEIOBQ8N635 442 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 MOAP1Q96BY2 351 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 TMCO6Q96DC7 493 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 INSM2Q96T92 566 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 SLC6A17Q9H1V8 727 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 PDE7BQ9NP56 450 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 DKK3Q9UBP4 350 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 IFT52Q9Y366 437 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 MAU2Q9Y6X3 613 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 A0A1W2PPK0 400 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 GRXCR2A6NFK2 248 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 NFATC3Q12968 1075 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 PTGES3Q15185 160 aaKnown RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 C6orf132Q5T0Z8 1188 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 GTF2IRD2BQ6EKJ0 949 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 GTF2IRD2Q86UP8 949 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 RASGRP3Q8IV61 690 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 TRIM43Q96BQ3 446 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-203ENST00000378169 SHDQ96IW2 340 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 PRRG4Q9BZD6 226 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 ACTL8Q9H568 366 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 CNIH4Q9P003 139 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 RP1P56715 2156 aa12.53□□□□□ -0.4
NPHP4-203ENST00000378169 PRRT4C9JH25 899 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 PSMD9O00233 223 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 B3GALT4O96024 378 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 RENP00797 406 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF26P17031 533 aaPredicted RBP12.52□□□□□ -0.4
NPHP4-203ENST00000378169 TUBA1BP68363 451 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 BNC1Q01954 994 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 UGT8Q16880 541 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.52□□□□□ -0.4
NPHP4-203ENST00000378169 SLCO4C1Q6ZQN7 724 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 TUBA1AQ71U36 451 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 NRMQ8IXM6 262 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 OR2T33Q8NG76 320 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 FAM46AQ96IP4 442 aaKnown RBP12.52□□□□□ -0.4
NPHP4-203ENST00000378169 ZFYVE21Q9BQ24 234 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 TRIM36Q9NQ86 728 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF221Q9UK13 617 aa12.52□□□□□ -0.4
NPHP4-203ENST00000378169 LILRB3O75022 631 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 LDB3O75112 727 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 CSF2P04141 144 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 CD2P06729 351 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 ZNF888P0CJ79 500 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 MAOBP27338 520 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 NUP62P37198 522 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 VLDLRP98155 873 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 PRDX1Q06830 199 aaKnown RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 LRIT3Q3SXY7 679 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 ERMAPQ96PL5 475 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 TM9SF2Q99805 663 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 TMEM45AQ9NWC5 275 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 SPTA1P02549 2419 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 OR2B3O76000 313 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 EDNRAP25101 427 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 ATP5A1P25705 553 aaKnown RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 NAA10P41227 235 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 DNASE1L1P49184 302 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 BMXP51813 675 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 CRYZQ08257 329 aaKnown RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 HNRNPA0Q13151 305 aaKnown RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 SYPL1Q16563 259 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 ANKDD1AQ495B1 522 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 BICRALQ6AI39 1079 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 PIWIL3Q7Z3Z3 882 aaKnown RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 FAM86B1Q8N7N1 296 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 MFSD2AQ8NA29 543 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 FANK1Q8TC84 345 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 THEM6Q8WUY1 208 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms