RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 ZNF486Q96H40 463 aaPredicted RBP9.41□□□□□ -0.9
SPEN-201ENST00000375759 SLC25A44Q96H78 314 aaPredicted RBP9.41□□□□□ -0.9
SPEN-201ENST00000375759 EMC8O43402 210 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 FAM214AQ32MH5 1076 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 SLC18B1Q6NT16 456 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 IGDCC3Q8IVU1 814 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 ALDH16A1Q8IZ83 802 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 MT-CO2P00403 227 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 AK1P00568 194 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 CD1DP15813 335 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 ARL6IP1Q15041 203 aa9.41□□□□□ -0.9
SPEN-201ENST00000375759 ASCC3Q8N3C0 2202 aaKnown RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 RPL17P18621 184 aaKnown RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 POLR2HP52434 150 aaKnown RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 ZNF674Q2M3X9 581 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 Q6ZVU0 165 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 TMPRSS9Q7Z410 1059 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 OR2T35Q8NGX2 323 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 BORCS7Q96B45 105 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 DNTTIP1Q9H147 329 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 FBXL12Q9NXK8 326 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 F7P08709 466 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 RPL35P42766 123 aaKnown RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 IDH3GP51553 393 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 RCAN2Q14206 197 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 RPS27LQ71UM5 84 aaKnown RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 ZNF559Q9BR84 538 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 DNAJC5Q9H3Z4 198 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 MAN2C1Q9NTJ4 1040 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 FAM86C1Q9NVL1 165 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 IRS2Q9Y4H2 1338 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 EVI2BP34910 448 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 NAA10P41227 235 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 NKX2-5P52952 324 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 MS4A13Q5J8X5 152 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 TRIM46Q7Z4K8 759 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 GPR149Q86SP6 731 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 TRAM1L1Q8N609 369 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 HDHD5Q9BXW7 423 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 ANKRD60Q9BZ19 345 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 ARMC1Q9NVT9 282 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 RGPD8O14715 1765 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 SHMT2P34897 504 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 RAB4BP61018 213 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 EIF4HQ15056 248 aaKnown RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 SUSD1Q6UWL2 747 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 GKN2Q86XP6 184 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 DCAF4L2Q8NA75 395 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 SOX17Q9H6I2 414 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 APMAPQ9HDC9 416 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 GPR83Q9NYM4 423 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 A0A1W2PRU2 124 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 HHLA1C9JL84 531 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 GABRA3P34903 492 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 TAS2R31P59538 309 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 RAB31Q13636 194 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 FGL2Q14314 439 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 LRIT3Q3SXY7 679 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 UGT3A2Q3SY77 523 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 ZNF776Q68DI1 518 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 TMEM173Q86WV6 379 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 DNAAF1Q8NEP3 725 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 OR6Q1Q8NGQ2 317 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 ZNF436Q9C0F3 470 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 PEX12O00623 359 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 LYRM1O43325 122 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 HCRTR2O43614 444 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 REM2Q8IYK8 340 aaPredicted RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 CELF5Q8N6W0 485 aaKnown RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 GLYATL2Q8WU03 294 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 FAM230AA0A1W2PPH8 454 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 ANKRD33BA6NCL7 494 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 C11orf98E9PRG8 122 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 F5H5P2 479 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 ARPC5O15511 151 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 ADH1BP00325 375 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 THBS2P35442 1172 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 EMC10Q5UCC4 262 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 CCDC116Q8IYX3 515 aa9.4□□□□□ -0.9
SPEN-201ENST00000375759 RRNAD1Q96FB5 475 aaKnown RBP9.4□□□□□ -0.9
SPEN-201ENST00000375759 SCAMP1O15126 338 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 AMY2AP04746 511 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 FAM69AQ5T7M9 428 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 CES4AQ5XG92 561 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 ZNF280BQ86YH2 543 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 GLIS1Q8NBF1 620 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 FAM53CQ9NYF3 392 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 A0A0A6YYH2 397 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 A6NJ64 397 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 GGT1P19440 569 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 ACRV1P26436 265 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 SNRPD2P62316 118 aaKnown RBP9.4□□□□□ -0.91
SPEN-201ENST00000375759 MALLQ13021 153 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 UNC5DQ6UXZ4 953 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 TERB2Q8NHR7 220 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 POT1Q9NUX5 634 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 AIG1Q9NVV5 245 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 TEX10Q9NXF1 929 aaPredicted RBP9.4□□□□□ -0.91
SPEN-201ENST00000375759 C10orf71Q711Q0 1435 aa9.4□□□□□ -0.91
SPEN-201ENST00000375759 TPT1P13693 172 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms