RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 B3GNT8Q7Z7M8 397 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 MS4A15Q8N5U1 240 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 OR2AJ1Q8NGZ0 328 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 OR8K3Q8NH51 312 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 FIBINQ8TAL6 211 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 THRSPQ92748 146 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 RNF121Q9H920 327 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 UBQLN2Q9UHD9 624 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 C12orf71A8MTZ7 269 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 CAPNS1P04632 268 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 SRCP12931 536 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF20P17024 532 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 CCKBRP32239 447 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 CEBPGP53567 150 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 E2F1Q01094 437 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 UBE2UQ5VVX9 321 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF776Q68DI1 518 aaPredicted RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 FRMPD2BQ6IN97 320 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 TMEM107Q6UX40 140 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 DPH7Q9BTV6 452 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 PNO1Q9NRX1 252 aaKnown RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 HPF1Q9NWY4 346 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 HCN3Q9P1Z3 774 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 C5AR2Q9P296 337 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 LAMP5Q9UJQ1 280 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 LOC100509620A0A075B734 347 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 MROH6A6NGR9 719 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TEX46H3BTG2 121 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 LYRM1O43325 122 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 H2AFB2P0C5Z0 115 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SOX3P41225 446 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 DECR1Q16698 335 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 DEFB134Q4QY38 66 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 CATSPEREQ5SY80 951 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 DNM1P34Q6PK57 102 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 Q6ZSR9 355 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TMIEQ8NEW7 156 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TESCQ96BS2 214 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 BRF2Q9HAW0 419 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 CD300AQ9UGN4 299 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 FEZF1A0PJY2 475 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 UNC119BA6NIH7 251 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SMAD9O15198 467 aaKnown RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TEX28O15482 410 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 GATBO75879 557 aaKnown RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SMIM18P0DKX4 95 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 ATXN7L3Q14CW9 347 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 RAB12Q6IQ22 244 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 IQCF2Q8IXL9 164 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SLC7A5P1Q8MH63 180 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 PELI3Q8N2H9 469 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SETD6Q8TBK2 473 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 PDLIM5Q96HC4 596 aaKnown RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 PPIL3Q9H2H8 161 aaKnown RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TTC34A8MYJ7 566 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 RNASET2O00584 256 aaKnown RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 UBFD1O14562 309 aaKnown RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SNAPC5O75971 98 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 GDI1P31150 447 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 MAGEA12P43365 314 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 MAN2A2P49641 1150 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 IRF5Q13568 498 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 ELAVL3Q14576 367 aaKnown RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TMEM69Q5SWH9 247 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 AGAP6Q5VW22 663 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SPATC1Q76KD6 591 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SYNPOQ8N3V7 929 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 CHST14Q8NCH0 376 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 ANKK1Q8NFD2 765 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 ASB15Q8WXK1 588 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 AGAP4Q96P64 663 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 SH2B3Q9UQQ2 575 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 CRYBG1Q9Y4K1 1723 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TRBV2A0A0J9YWF9 115 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 GRXCR1A8MXD5 290 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 KAT7O95251 611 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 PFKLP17858 780 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 CFL1P23528 166 aaKnown RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TAS2R38P59533 333 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF550Q7Z398 422 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 OR6N2Q8NGY6 317 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 HCAR2Q8TDS4 363 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 MUL1Q969V5 352 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 CHFRQ96EP1 664 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 DPCDQ9BVM2 203 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-203ENST00000375274 TREM1Q9NP99 234 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 NANSQ9NR45 359 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 ANKMY1Q9P2S6 941 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 GRHPRQ9UBQ7 328 aa10.99□□□□□ -0.65
PTCH1-203ENST00000375274 CLDN24A6NM45 220 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 GABRR3A8MPY1 467 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 M0R3H8 397 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 RP2O75695 350 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF806P0C7X5 589 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 SEMA3BQ13214 749 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 LSM14AQ8ND56 463 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 OR8K5Q8NH50 307 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 FAM46AQ96IP4 442 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms