RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PARP16Q8N5Y8 322 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 ZNF513Q8N8E2 541 aaPredicted RBP16.12■□□□□ 0.17
RXRB-201ENST00000374680 ZFP41Q8N8Y5 198 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 ZNF607Q96SK3 696 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 EGLN3Q9H6Z9 239 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 MRPS30Q9NP92 439 aaKnown RBP16.12■□□□□ 0.17
RXRB-201ENST00000374680 SLC35C2Q9NQQ7 365 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 INIPQ9NRY2 104 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 PLCXD1Q9NUJ7 323 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 FBXL12Q9NXK8 326 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 SCHIP1Q9P0W5 487 aaPredicted RBP16.12■□□□□ 0.17
RXRB-201ENST00000374680 REV1Q9UBZ9 1251 aa16.12■□□□□ 0.17
RXRB-201ENST00000374680 KMOO15229 486 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 PRKYO43930 277 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 EN2P19622 333 aaPredicted RBP16.11■□□□□ 0.17
RXRB-201ENST00000374680 GRK3P35626 688 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 AVPR1BP47901 424 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 KCNJ5P48544 419 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 HMGA2P52926 109 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 PRDX1Q06830 199 aaKnown RBP16.11■□□□□ 0.17
RXRB-201ENST00000374680 LRRC32Q14392 662 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 PLAG1Q6DJT9 500 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 PGBD2Q6P3X8 592 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 IKBIPQ70UQ0 350 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 YAF2Q8IY57 180 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 KCT2Q8NC54 265 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 OR52E1Q8NGJ3 308 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 FCGR1BQ92637 280 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 TRMT61AQ96FX7 289 aaKnown RBP16.11■□□□□ 0.17
RXRB-201ENST00000374680 MAPKAP1Q9BPZ7 522 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 MARCH7Q9H992 704 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 CNIH4Q9P003 139 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 YARS2Q9Y2Z4 477 aaKnown RBP16.11■□□□□ 0.17
RXRB-201ENST00000374680 LTBP2Q14767 1821 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 A0A1W2PQU0 124 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 AGAP5A6NIR3 686 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 CPSF4LA6NMK7 179 aaKnown RBP16.11■□□□□ 0.17
RXRB-201ENST00000374680 H0Y8X5 98 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 CHRM4P08173 479 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 OSMP13725 252 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 GDI1P31150 447 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 EIF2DP41214 584 aaKnown RBP16.11■□□□□ 0.17
RXRB-201ENST00000374680 TPTEP56180 551 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 GINS1Q14691 196 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 ZER1Q7Z7L7 766 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 FRMD1Q8N878 549 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 OR4K5Q8NGD3 323 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 CNRIP1Q96F85 164 aaPredicted RBP16.11■□□□□ 0.17
RXRB-201ENST00000374680 TSSK6Q9BXA6 273 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 POLR2J2Q9GZM3 115 aaKnown RBP16.11■□□□□ 0.17
RXRB-201ENST00000374680 RHBGQ9H310 441 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 CD93Q9NPY3 652 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 TOR4AQ9NXH8 423 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 ICKQ9UPZ9 632 aa16.11■□□□□ 0.17
RXRB-201ENST00000374680 DPM1O60762 260 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 MMP11P24347 488 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 DAB2P98082 770 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 TOR1AIP1Q5JTV8 583 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 B3GLCTQ6Y288 498 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 VRK2Q86Y07 508 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 LYSMD2Q8IV50 215 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 OR8H2Q8N162 312 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 ACOT4Q8N9L9 421 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 CCL4L1Q8NHW4 92 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 ZCCHC10Q8TBK6 192 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 PPP1R14BQ96C90 147 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 CEP19Q96LK0 163 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 ZNF354BQ96LW1 612 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 E9PQ18 207 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 EML2O95834 649 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 RPN2P04844 631 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 SERPINB1P30740 379 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 MC3RP41968 323 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 OLR1P78380 273 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 REEP5Q00765 189 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 SLC9A5Q14940 896 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 ADAMTSL4Q6UY14 1074 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 UBE2J2Q8N2K1 259 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 OR9A2Q8NGT5 310 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 MMP27Q9H306 513 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 NEUROD4Q9HD90 331 aa16.1■□□□□ 0.17
RXRB-201ENST00000374680 GPR55Q9Y2T6 319 aaPredicted RBP16.1■□□□□ 0.17
RXRB-201ENST00000374680 ZNF860A6NHJ4 632 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 DNAJB6O75190 326 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 PBX2P40425 430 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 SNAPC1Q16533 368 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 OR2G6Q5TZ20 316 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 ZBTB8BQ8NAP8 495 aaPredicted RBP16.09■□□□□ 0.17
RXRB-201ENST00000374680 APOBEC4Q8WW27 367 aaKnown RBP16.09■□□□□ 0.17
RXRB-201ENST00000374680 PLA2G12AQ9BZM1 189 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 FKBP14Q9NWM8 211 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 THAP10Q9P2Z0 257 aaPredicted RBP16.09■□□□□ 0.17
RXRB-201ENST00000374680 P2RX2Q9UBL9 471 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 DPP7Q9UHL4 492 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 MKLN1Q9UL63 735 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 A4GNTQ9UNA3 340 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 MDC1Q14676 2089 aaKnown RBP16.09■□□□□ 0.17
RXRB-201ENST00000374680 EFCAB10A6NFE3 127 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 BTN3A2P78410 334 aa16.09■□□□□ 0.17
RXRB-201ENST00000374680 EIF4HQ15056 248 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms