RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ITPRIPL2Q3MIP1 535 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 ZFP90Q8TF47 636 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 RBPMSQ93062 196 aaKnown RBP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 SARDHQ9UL12 918 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 EEDO75530 441 aaKnown RBP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 IL10RBQ08334 325 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 SLAMF1Q13291 335 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 YIF1BQ5BJH7 314 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 CMIPQ8IY22 773 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 B4GALT4O60513 344 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 CBR1P16152 277 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 HNRNPKP61978 463 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 HABP2Q14520 560 aaPredicted RBP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 PCBP2Q15366 365 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 TIFABQ6ZNK6 161 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 LACC1Q8IV20 430 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 PXT1Q8NFP0 134 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 OR1E3Q8WZA6 343 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 ZDHHC12Q96GR4 267 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF395Q9H8N7 513 aaPredicted RBP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 HRH3Q9Y5N1 445 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 H2BFMP0C1H6 154 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 HACD4Q5VWC8 232 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 GIMAP1Q8WWP7 306 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 SDHAF2Q9NX18 166 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 E9PCH4 1651 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 KNG1P01042 644 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 PPT1P50897 306 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 TP53TG5Q9Y2B4 290 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 SLC27A5Q9Y2P5 690 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 TLL1O43897 1013 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 CNOT4O95628 575 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 CCNOP22674 350 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 MEF2DQ14814 521 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 OR10K1Q8NGX5 313 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 FCRL1Q96LA6 429 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 GPR22Q99680 433 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 TMEM150CB9EJG8 249 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 P2RX6O15547 441 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 TGFB1I1O43294 461 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 HTR3BO95264 441 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 ARAFP10398 606 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 CX3CR1P49238 355 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 VAMP3Q15836 100 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 SRMSQ9H3Y6 488 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 SLC22A14Q9Y267 594 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 MGST1P10620 155 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 RELTQ969Z4 430 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 MYOCQ99972 504 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 FZD10Q9ULW2 581 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 BRWD1Q9NSI6 2320 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 IQGAP1P46940 1657 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 TRAV20A0A0B4J274 112 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 MEIS3P2A8K0S8 358 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 ARPC1BO15143 372 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 NIPSNAP2O75323 286 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 TAS2R30P59541 319 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 SLC25A31Q9H0C2 315 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 MAGEH1Q9H213 219 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 DTLQ9NZJ0 730 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 DCAF12L1Q5VU92 463 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 PRAMEF18Q5VWM3 479 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 AWAT2Q6E213 333 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 PRSS55Q6UWB4 352 aaPredicted RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 ALKAL2Q6UX46 152 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 ENTHD1Q8IYW4 607 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 POLDIP3Q9BY77 421 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 FKBPLQ9UIM3 349 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 SIX4Q9UIU6 781 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 CORO1AP31146 461 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 CDKN1CP49918 316 aaPredicted RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 RIDAP52758 137 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 RIN1Q13671 783 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 HNRNPDQ14103 355 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 ETFRF1Q6IPR1 90 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 PARP16Q8N5Y8 322 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 OR4F6Q8NGB9 312 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 IRGQQ8WZA9 623 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 DAZAP1Q96EP5 407 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 C14orf79Q96F83 325 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 MFSD1Q9H3U5 465 aa14.62□□□□□ -0.07
COL5A1-201ENST00000371817 TESQ9UGI8 421 aaKnown RBP14.62□□□□□ -0.07
COL5A1-201ENST00000371817 LOC285095A0A1B0GVY8 99 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 MTMR11A4FU01 709 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 TOX4O94842 621 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 TMEM63AO94886 807 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 AK4P27144 223 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-201ENST00000371817 SOX3P41225 446 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 EIF4HQ15056 248 aaKnown RBP14.61□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF783Q6ZMS7 281 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 AMZ2Q86W34 360 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 SPPL2BQ8TCT7 592 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 C22orf15Q8WYQ4 148 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 KLHL13Q9P2N7 655 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 STBD1O95210 358 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 RAB3DO95716 219 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 HLA-AP01891 365 aaKnown RBP14.61□□□□□ -0.07
COL5A1-201ENST00000371817 KCNJ11Q14654 390 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 RNF19AQ9NV58 838 aa14.61□□□□□ -0.07
COL5A1-201ENST00000371817 CILPO75339 1184 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms