RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 RAB8AP61006 207 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 TARDBPQ13148 414 aaKnown RBP eCLIP27.3■■□□□ 1.961e-6■■■□□ 15.9
SSBP3-204ENST00000371320 LASP1Q14847 261 aaKnown RBP27.3■■□□□ 1.96
SSBP3-204ENST00000371320 TMEM196Q5HYL7 178 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 C18orf63Q68DL7 685 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 SDE2Q6IQ49 451 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 ANKRD54Q6NXT1 300 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 MFSD9Q8NBP5 474 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 SRFBP1Q8NEF9 429 aaKnown RBP27.3■■□□□ 1.96
SSBP3-204ENST00000371320 SCARF2Q96GP6 870 aaPredicted RBP27.3■■□□□ 1.96
SSBP3-204ENST00000371320 FUZQ9BT04 418 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 SARGQ9BW04 601 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 KIR3DX1Q9H7L2 352 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 BCL2L10Q9HD36 194 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 ISM1B1AKI9 464 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 ENTPD6O75354 484 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 HMGN2P05204 90 aaKnown RBP27.29■■□□□ 1.96
SSBP3-204ENST00000371320 C8orf89P0DMQ9 161 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 FEN1P39748 380 aaKnown RBP27.29■■□□□ 1.96
SSBP3-204ENST00000371320 SNRPGP62308 76 aaKnown RBP27.29■■□□□ 1.96
SSBP3-204ENST00000371320 GNA13Q14344 377 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 TRIM16LQ309B1 348 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 SLX4IPQ5VYV7 408 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 PLAG1Q6DJT9 500 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 ROGDIQ9GZN7 287 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 DAPK2Q9UIK4 370 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 SNX7Q9UNH6 387 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 MYO10Q9HD67 2058 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 LOC100506127A0A0U1RQW1 187 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 CHRM4P08173 479 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 GRK5P34947 590 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 DUSP2Q05923 314 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 ATAT1Q5SQI0 421 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 OR2M4Q96R27 311 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 FNDC11Q9BVV2 318 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 DSN1Q9H410 356 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 IFT52Q9Y366 437 aa27.29■■□□□ 1.96
SSBP3-204ENST00000371320 A0A1W2PRQ8 180 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 PRSS38A1L453 326 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 EPOPA6NHQ4 379 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 SLC15A1P46059 708 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 SHHQ15465 462 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 PERM1Q5SV97 790 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 SLC48A1Q6P1K1 146 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 TMEM107Q6UX40 140 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 HMGN2P46Q86SG4 172 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 OR56A1Q8NGH5 318 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 Q96MT0 163 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 MCOLN1Q9GZU1 580 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 OR51E2Q9H255 320 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 SYNPO2LQ9H987 977 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 APOBEC3BQ9UH17 382 aaKnown RBP27.28■■□□□ 1.96
SSBP3-204ENST00000371320 NDOR1Q9UHB4 597 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 ATG2BQ96BY7 2078 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 FUOMA2VDF0 154 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 NME6O75414 186 aaPredicted RBP27.28■■□□□ 1.96
SSBP3-204ENST00000371320 FHP07954 510 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 PIPP12273 146 aaPredicted RBP27.28■■□□□ 1.96
SSBP3-204ENST00000371320 CSNK2A2P19784 350 aaPredicted RBP27.28■■□□□ 1.96
SSBP3-204ENST00000371320 FUT5Q11128 374 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 ZNF404Q494X3 552 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 ZNF425Q6IV72 752 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 PODNL1Q6PEZ8 512 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 CASP12Q6UXS9 341 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 OR4E2Q8NGC2 313 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 LCN9Q8WX39 176 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 MOAP1Q96BY2 351 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 GABRG3Q99928 467 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 MMP27Q9H306 513 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 SLC25A19Q9HC21 320 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 DNAAF2Q9NVR5 837 aaKnown RBP27.28■■□□□ 1.96
SSBP3-204ENST00000371320 CES1P1Q9UKY3 287 aa27.28■■□□□ 1.96
SSBP3-204ENST00000371320 SLITRK5O94991 958 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 ADRA2AP08913 450 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 TSFMP43897 325 aaKnown RBP27.27■■□□□ 1.96
SSBP3-204ENST00000371320 STXBP1P61764 594 aaKnown RBP27.27■■□□□ 1.96
SSBP3-204ENST00000371320 PPP2CBP62714 309 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 PPP2CAP67775 309 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 MED22Q15528 200 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 TBC1D25Q3MII6 688 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 TJAP1Q5JTD0 557 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 C12orf73Q69YU5 71 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 NIPAL1Q6NVV3 410 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 AMIGO1Q86WK6 493 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 KBTBD8Q8NFY9 601 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 OR5M11Q96RB7 305 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 GIMAP4Q9NUV9 329 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 TBC1D29Q9UFV1 150 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 PCDHGA3Q9Y5H0 932 aa27.27■■□□□ 1.96
SSBP3-204ENST00000371320 TPST2O60704 377 aa27.26■■□□□ 1.95
SSBP3-204ENST00000371320 ASGR2P07307 311 aa27.26■■□□□ 1.95
SSBP3-204ENST00000371320 CHRM5P08912 532 aaPredicted RBP27.26■■□□□ 1.95
SSBP3-204ENST00000371320 DBTP11182 482 aaKnown RBP27.26■■□□□ 1.95
SSBP3-204ENST00000371320 F3P13726 295 aa27.26■■□□□ 1.95
SSBP3-204ENST00000371320 BUD31P41223 144 aaPredicted RBP27.26■■□□□ 1.95
SSBP3-204ENST00000371320 TCEA2Q15560 299 aa27.26■■□□□ 1.95
SSBP3-204ENST00000371320 GPAT3Q53EU6 434 aa27.26■■□□□ 1.95
SSBP3-204ENST00000371320 TMEM184AQ6ZMB5 413 aa27.26■■□□□ 1.95
SSBP3-204ENST00000371320 WDR36Q8NI36 951 aaKnown RBP27.26■■□□□ 1.95
SSBP3-204ENST00000371320 C16orf58Q96GQ5 468 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms