RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 MYOTQ9UBF9 498 aa13.57□□□□□ -0.24
SF3B5-201ENST00000367569 ZDHHC2Q9UIJ5 367 aa13.57□□□□□ -0.24
SF3B5-201ENST00000367569 ERVK-11Q9UQG0 969 aa13.57□□□□□ -0.24
SF3B5-201ENST00000367569 TRAF6Q9Y4K3 522 aa13.57□□□□□ -0.24
SF3B5-201ENST00000367569 GOLGA6L10A6NI86 522 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 A8MVJ9 347 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 RGS14O43566 566 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 AKAP10O43572 662 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 NME2P1O60361 137 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 CHEK2O96017 543 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 SP1P08047 785 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 NEFHP12036 1026 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 CD46P15529 392 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 PORP16435 677 aaPredicted RBP13.56□□□□□ -0.24
SF3B5-201ENST00000367569 PCSK2P16519 638 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 NME2P22392 152 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 PER3P56645 1201 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 SLC37A1P57057 533 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 KCNK10P57789 538 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 EBPQ15125 230 aaKnown RBP13.56□□□□□ -0.24
SF3B5-201ENST00000367569 C1QL3Q5VWW1 255 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 NOXRED1Q6NXP6 359 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 Q6ZSR9 355 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 SLC29A4Q7RTT9 530 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 TRIM46Q7Z4K8 759 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 TICAM1Q8IUC6 712 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 LRRC25Q8N386 305 aaPredicted RBP13.56□□□□□ -0.24
SF3B5-201ENST00000367569 VWA5B2Q8N398 1253 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 ZNF781Q8N8C0 355 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 OR5M3Q8NGP4 307 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 NR4A3Q92570 626 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 KAT2AQ92830 837 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 C11orf24Q96F05 449 aaPredicted RBP13.56□□□□□ -0.24
SF3B5-201ENST00000367569 ART5Q96L15 291 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 C3orf30Q96M34 536 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 TSSK3Q96PN8 268 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 C20orf27Q9GZN8 174 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 WWTR1Q9GZV5 400 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 TMBIM4Q9HC24 238 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 EML4Q9HC35 981 aaKnown RBP13.56□□□□□ -0.24
SF3B5-201ENST00000367569 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
SF3B5-201ENST00000367569 HPF1Q9NWY4 346 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 C1orf109Q9NX04 203 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 MAT2BQ9NZL9 334 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 BCAP29Q9UHQ4 241 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 ENTPD4Q9Y227 616 aa13.56□□□□□ -0.24
SF3B5-201ENST00000367569 A0A1B0GUH1 482 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 SERTM1A2A2V5 107 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 PINLYPA6NC86 204 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 H3BQF6 201 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 SLC28A1O00337 649 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 LSM1O15116 133 aaKnown RBP13.55□□□□□ -0.24
SF3B5-201ENST00000367569 TM9SF1O15321 606 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 PEX11AO75192 247 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 ZWINTO95229 277 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 NADKO95544 446 aaPredicted RBP13.55□□□□□ -0.24
SF3B5-201ENST00000367569 SERPINE1P05121 402 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 DHRS4L1P0CG22 281 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 SDC1P18827 310 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 EFNA1P20827 205 aaPredicted RBP13.55□□□□□ -0.24
SF3B5-201ENST00000367569 TRHRP34981 398 aaPredicted RBP13.55□□□□□ -0.24
SF3B5-201ENST00000367569 SOX18P35713 384 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 MEOX1P50221 254 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 WDR4P57081 412 aaKnown RBP13.55□□□□□ -0.24
SF3B5-201ENST00000367569 HSF1Q00613 529 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 UGT3A2Q3SY77 523 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 HHATQ5VTY9 493 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 SLC25A25Q6KCM7 469 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 GALNT18Q6P9A2 607 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 CCDC116Q8IYX3 515 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 TMEM178AQ8NBL3 297 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 OR6Y1Q8NGX8 325 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 TMEM125Q96AQ2 219 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 ZNF681Q96N22 645 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 FRMD6Q96NE9 622 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 ITPAQ9BY32 194 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 MYNNQ9NPC7 610 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 MIEF1Q9NQG6 463 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 DEPPQ9NTK1 212 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 BAIAP2L1Q9UHR4 511 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
SF3B5-201ENST00000367569 YARS2Q9Y2Z4 477 aaKnown RBP13.55□□□□□ -0.24
SF3B5-201ENST00000367569 ZNF780BQ9Y6R6 833 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 PCNX1Q96RV3 2341 aa13.55□□□□□ -0.24
SF3B5-201ENST00000367569 SYNDIG1LA6NDD5 238 aa13.54□□□□□ -0.24
SF3B5-201ENST00000367569 CCL3P10147 92 aa13.54□□□□□ -0.24
SF3B5-201ENST00000367569 CSNK2A2P19784 350 aaPredicted RBP13.54□□□□□ -0.24
SF3B5-201ENST00000367569 NR0B1P51843 470 aaKnown RBP13.54□□□□□ -0.24
SF3B5-201ENST00000367569 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
SF3B5-201ENST00000367569 TRA2BP62995 288 aaKnown RBP13.54□□□□□ -0.24
SF3B5-201ENST00000367569 MGAT2Q10469 447 aa13.54□□□□□ -0.24
SF3B5-201ENST00000367569 INAQ16352 499 aa13.54□□□□□ -0.24
SF3B5-201ENST00000367569 PRICKLE4Q2TBC4 344 aa13.54□□□□□ -0.24
SF3B5-201ENST00000367569 RFTN2Q52LD8 501 aaPredicted RBP13.54□□□□□ -0.24
SF3B5-201ENST00000367569 TRMT12Q53H54 448 aaKnown RBP13.54□□□□□ -0.24
SF3B5-201ENST00000367569 ZNF385BQ569K4 471 aa13.54□□□□□ -0.24
SF3B5-201ENST00000367569 XKR7Q5GH72 579 aa13.54□□□□□ -0.24
SF3B5-201ENST00000367569 RNFT1Q5M7Z0 435 aa13.54□□□□□ -0.24
SF3B5-201ENST00000367569 PRAMEF20Q5VT98 475 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms