RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 GALEQ14376 348 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ATG9BQ674R7 924 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TANGO2Q6ICL3 276 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TRIB2Q92519 343 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 RBMXL1Q96E39 390 aaKnown RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 DTLQ9NZJ0 730 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TCRBV7S2A1N4TA0A589 114 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF736B4DX44 427 aaPredicted RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PBX2P40425 430 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PCBP2Q15366 365 aaKnown RBP eCLIP8.91□□□□□ -0.981e-8■■■■■ 38.2
VPS13A-203ENST00000360280 OR7G1Q8NGA0 311 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 OR4F6Q8NGB9 312 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 DGKQP52824 942 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 DNAJB13P59910 316 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PMS2P3Q13401 168 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 HIST2H3PS2Q5TEC6 136 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SMPDL3AQ92484 453 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 P2RY13Q9BPV8 354 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 CNOT11Q9UKZ1 510 aaKnown RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SARDHQ9UL12 918 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 MAS1P04201 325 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 UFM1P61960 85 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 LRFN4Q6PJG9 635 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 SLC2A7Q6PXP3 512 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 ACBD7Q8N6N7 88 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 TRMT10AQ8TBZ6 339 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 PDE4DIPQ5VU43 2346 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF701M0R085 212 aaPredicted RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 PIGRP01833 764 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 G6PDP11413 515 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 SPRYD4Q8WW59 207 aaPredicted RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 NANOS1Q8WY41 292 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 MCHR1Q99705 422 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 ADAM19Q9H013 955 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 TAC3Q9UHF0 121 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 LCMT2O60294 686 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 SPATA31D3P0C874 917 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 SPATA31D4Q6ZUB0 917 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 ACTRT3Q9BYD9 372 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 TGFB1I1O43294 461 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 VEGFDO43915 354 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 APOA2P02652 100 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 AKAIN1P0CW23 69 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 RBM39Q14498 530 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 SLC6A5Q9Y345 797 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 CD48P09326 243 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 DCUN1D3Q8IWE4 304 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 REEP4Q9H6H4 257 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 NLKQ9UBE8 527 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 IL20RAQ9UHF4 553 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 B3GNT3Q9Y2A9 372 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 C4BPAP04003 597 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 MAT2AP31153 395 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 PTGIRP43119 386 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 HES5Q5TA89 166 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 CILP2Q8IUL8 1156 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 OR5AK2Q8NH90 309 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF382Q96SR6 550 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 GAS2L1Q99501 681 aaPredicted RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 HINT2Q9BX68 163 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 YARS2Q9Y2Z4 477 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 A0A087WUU8 490 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 C2orf78A6NCI8 922 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 ETV6P41212 452 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 CLCNKBP51801 687 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 NLRP8Q86W28 1048 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 GKN2Q86XP6 184 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 FBXO22Q8NEZ5 403 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 MANBAO00462 879 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 AOC2O75106 756 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 EEDO75530 441 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 TAL1P17542 331 aaPredicted RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 OR1E2P47887 323 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 FASLGP48023 281 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 POU6F2P78424 691 aaPredicted RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 AMZ1Q400G9 498 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 NDUFAF5Q5TEU4 345 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 DPF1Q92782 380 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 CARS2Q9HA77 564 aaKnown RBP8.9□□□□□ -0.98
VPS13A-203ENST00000360280 PCDHA2Q9Y5H9 948 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 TNS2Q63HR2 1409 aa8.9□□□□□ -0.98
VPS13A-203ENST00000360280 ACOT7O00154 380 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 PBX1P40424 430 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 ETV1P50549 477 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 GINS1Q14691 196 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 CHCHD4Q8N4Q1 142 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 C16orf78Q8WTQ4 265 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 RBCK1Q9BYM8 510 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 MAF1Q9H063 256 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 TLE6Q9H808 572 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 FAM118AQ9NWS6 357 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 CACNG2Q9Y698 323 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 TSPAN11A1L157 253 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 INPPL1O15357 1258 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 LATO43561 262 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 VIPR1P32241 457 aa8.9□□□□□ -0.99
VPS13A-203ENST00000360280 SEC13P55735 322 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms