RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ESRP1Q6NXG1 681 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 MZT2BQ6NZ67 158 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 LILRA6Q6PI73 481 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 CARFQ8N187 725 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 C19orf18Q8NEA5 215 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 AKR7LQ8NHP1 331 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 NUDT8Q8WV74 236 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 POM121Q96HA1 1249 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 FCRL2Q96LA5 508 aaPredicted RBP8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 PPM1MQ96MI6 270 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 KLHL5Q96PQ7 755 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 ALX4Q9H161 411 aaPredicted RBP8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 DDX31Q9H8H2 851 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 FOLH1BQ9HBA9 442 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 PTTG3PQ9NZH4 202 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 DUSP12Q9UNI6 340 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 CBY1Q9Y3M2 126 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 DNAJC15Q9Y5T4 150 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 DOCK8Q8NF50 2099 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 ATG2BQ96BY7 2078 aa8.85□□□□□ -0.99
SMARCAL1-202ENST00000358207 IQCMA0A1B0GVH7 501 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SULT1C2O00338 296 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TSPAN3O60637 253 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PRKAR1AP10644 381 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ENGP17813 658 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SPI1P17947 270 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PAICSP22234 425 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 FOXA1P55317 472 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TNFRSF17Q02223 184 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TAF1AQ15573 450 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SSX2Q16385 188 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 UGT8Q16880 541 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 CPZQ66K79 652 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SCIMPQ6UWF3 145 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ALKAL2Q6UX46 152 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 IKBIPQ70UQ0 350 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF605Q86T29 641 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 Q8N402 240 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 DNAJC22Q8N4W6 341 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF454Q8N9F8 522 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 OR1S1Q8NH92 325 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PHF21BQ96EK2 531 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SMG9Q9H0W8 520 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 GSTO2Q9H4Y5 243 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 DLL4Q9NR61 685 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 DHCR7Q9UBM7 475 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 BTRCQ9Y297 605 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 A8MT66 165 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ISM1B1AKI9 464 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 CLDN4O14493 209 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TNFRSF10BO14763 440 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 GSTA4O15217 222 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 EEDO75530 441 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 RBBP9O75884 186 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 OR4F21O95013 312 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 HNRNPA1P09651 372 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 OR56A5P0C7T3 313 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 MEF2AQ02078 507 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 RCAN2Q14206 197 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 DPYSL2Q16555 572 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 RAB41Q5JT25 222 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TRIQKQ629K1 86 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 OR4F3Q6IEY1 312 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC9B2Q86UD5 537 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 STX19Q8N4C7 294 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 FTMTQ8N4E7 242 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 EIF4E3Q8N5X7 224 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 CHST14Q8NCH0 376 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 KCTD13Q8WZ19 329 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 CENPIQ92674 756 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 CREB3L1Q96BA8 519 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF707Q96C28 371 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF583Q96ND8 569 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 MGLLQ99685 303 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 KCNJ15Q99712 375 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TMEM43Q9BTV4 400 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PRR14Q9BWN1 585 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PPP1R3EQ9H7J1 279 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PLEKHB1Q9UF11 243 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ING1Q9UK53 422 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 POMT2Q9UKY4 750 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 EXO1Q9UQ84 846 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SMIM30A4D0T7 59 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 CLCA1A8K7I4 914 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 DPYSL4O14531 572 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TLR5O60602 858 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 RECKO95980 971 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF8P17098 575 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TYMPP19971 482 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SDHBP21912 280 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 STOMP27105 288 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 SUOXP51687 545 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PSMD4P55036 377 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 UFM1P61960 85 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 TEX30Q5JUR7 227 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PRAMEF13Q5VWM6 474 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 PID1Q7Z2X4 250 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 LDLRAD3Q86YD5 345 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ADGRF3Q8IZF5 1079 aa8.84□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF527Q8NB42 609 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms