RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SLC13A2Q13183 592 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 KRT71Q3SY84 523 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 FBXL19-AS1Q494R0 122 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 MSS51Q4VC12 460 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 HSDL2Q6YN16 418 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 CLNKQ7Z7G1 428 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 SLC51BQ86UW2 128 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 UBL4BQ8N7F7 174 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 MINDY2Q8NBR6 621 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 CHPT1Q8WUD6 406 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 CKAP2Q8WWK9 683 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 SLC7A6OSQ96CW6 309 aaPredicted RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 PERPQ96FX8 193 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 JSRP1Q96MG2 331 aaPredicted RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 AARSD1Q9BTE6 412 aaKnown RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 IL22Q9GZX6 179 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 DENND2DQ9H6A0 471 aaPredicted RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 MOV10Q9HCE1 1003 aaKnown RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 FBXO6Q9NRD1 293 aaPredicted RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 PRTFDC1Q9NRG1 225 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 ADAMTS6Q9UKP5 1117 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 MMACHCQ9Y4U1 282 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 USH1CQ9Y6N9 552 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 CSPG4Q6UVK1 2322 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 FBN1P35555 2871 aaKnown RBP10.31□□□□□ -0.76
RTN3-204ENST00000354497 ANKRD34BA5PLL1 514 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 PABPN1LA6NDY0 278 aaKnown RBP10.31□□□□□ -0.76
RTN3-204ENST00000354497 URADA6NGE7 173 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 PSMG1O95456 288 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 BMP7P18075 431 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 OGNP20774 298 aaKnown RBP10.31□□□□□ -0.76
RTN3-204ENST00000354497 SAT1P21673 171 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 GSSP48637 474 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 NPY2RP49146 381 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 GPR143P51810 404 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 HK2P52789 917 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 COX10Q12887 443 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 KLF1Q13351 362 aaPredicted RBP10.31□□□□□ -0.76
RTN3-204ENST00000354497 TGFBIQ15582 683 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 ACSF3Q4G176 576 aaPredicted RBP10.31□□□□□ -0.76
RTN3-204ENST00000354497 TOR1AIP1Q5JTV8 583 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 CATSPEREQ5SY80 951 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 FAM91A1Q658Y4 838 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 AAGABQ6PD74 315 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 LCTLQ6UWM7 567 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 CYHR1Q6ZMK1 362 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 PALM2Q8IXS6 379 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 ARHGAP24Q8N264 748 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 FAM47BQ8NA70 645 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 LILRB1Q8NHL6 650 aaPredicted RBP10.31□□□□□ -0.76
RTN3-204ENST00000354497 NT5CQ8TCD5 201 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 PYCR2Q96C36 320 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 EGLN2Q96KS0 407 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 GPR21Q99679 349 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 USB1Q9BQ65 265 aaKnown RBP10.31□□□□□ -0.76
RTN3-204ENST00000354497 PSD2Q9BQI7 771 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 AIFM2Q9BRQ8 373 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 HAUS8Q9BT25 410 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 NUF2Q9BZD4 464 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 KLHL31Q9H511 634 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 TCF7L2Q9NQB0 619 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 PAK5Q9P286 719 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 AMFRQ9UKV5 643 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 EIF3LQ9Y262 564 aaKnown RBP10.31□□□□□ -0.76
RTN3-204ENST00000354497 ATG4BQ9Y4P1 393 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 CLCA3PQ9Y6N3 262 aa10.31□□□□□ -0.76
RTN3-204ENST00000354497 ZNF407Q9C0G0 2248 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 A0A0G2JN53 185 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 A0A1W2PPR1 153 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 TRBC2A0A5B9 178 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 BTNL10A8MVZ5 291 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 CASKO14936 926 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 LIASO43766 372 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 TRMUO75648 421 aaKnown RBP10.3□□□□□ -0.76
RTN3-204ENST00000354497 GOSR1O95249 250 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 RFPL3SP0C7P2 107 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 ZSCAN5DPP0CG00 497 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 TNNI3P19429 210 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 RPL22P35268 128 aaKnown RBP10.3□□□□□ -0.76
RTN3-204ENST00000354497 RAP1GDS1P52306 607 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 ZNF136P52737 540 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 SLC18A1P54219 525 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 BTN3A2P78410 334 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 SORDQ00796 357 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 CHRNEQ04844 493 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 FOXO1Q12778 655 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 SIX1Q15475 284 aaPredicted RBP10.3□□□□□ -0.76
RTN3-204ENST00000354497 PRAMEF20Q5VT98 475 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 ZNF470Q6ECI4 717 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 CAPN12Q6ZSI9 719 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 CENPUQ71F23 418 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 PEX26Q7Z412 305 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 LACC1Q8IV20 430 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 PHC2Q8IXK0 858 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 LRRC75A-AS1Q8N1F1 130 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 TMEM132CQ8N3T6 1108 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 TOR1AIP2Q8NFQ8 470 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 C1orf54Q8WWF1 131 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms