RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 WASH2PQ6VEQ5 465 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 HMGN2P46Q86SG4 172 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF527Q8NB42 609 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 OR8J2Q8NGG1 315 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SLC5A11Q8WWX8 675 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 CIDECQ96AQ7 238 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SENP5Q96HI0 755 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 KLHL15Q96M94 604 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SLC6A18Q96N87 628 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 DDOQ99489 341 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 KCTD5Q9NXV2 234 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF175Q9Y473 711 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 H0YC42 278 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 RFXAPO00287 272 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 PITPNM1O00562 1244 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 GPR171O14626 319 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 PDCD5O14737 125 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 KHNYNO15037 678 aaKnown RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SIGLEC5O15389 551 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 H1F0P07305 194 aaKnown RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 FAM157BP0CG42 384 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 CD79BP40259 229 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 MAPKAPK2P49137 400 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 HNMTP50135 292 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SIGLEC14Q08ET2 396 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 CHRNA6Q15825 494 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 PRAMEF19Q5SWL8 479 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 CD276Q5ZPR3 534 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SFRP4Q6FHJ7 346 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ADNP2Q6IQ32 1131 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 LRFN4Q6PJG9 635 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 TMEM107Q6UX40 140 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 QSOX2Q6ZRP7 698 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ATAD1Q8NBU5 361 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 DBF4BQ8NFT6 615 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 OR52H1Q8NGJ2 320 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 OR8K3Q8NH51 312 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 HERVK_113Q902F9 699 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 MYO19Q96H55 970 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 OR2M2Q96R28 347 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SEPT5Q99719 369 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 USB1Q9BQ65 265 aaKnown RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF436Q9C0F3 470 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 FBXO44Q9H4M3 255 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 RC3H2Q9HBD1 1191 aaKnown RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZFYVE1Q9HBF4 777 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 IL17CQ9P0M4 197 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 COPZ2Q9P299 210 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 MLXQ9UH92 298 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 FBXL2Q9UKC9 423 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 MGAT4BQ9UQ53 548 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 TMEM5Q9Y2B1 443 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ARHGEF33A8MVX0 844 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 GABRPO00591 440 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SYN3O14994 580 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 HRO43593 1189 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 MT-ND4P03905 459 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 BCHEP06276 602 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 IRF1P10914 325 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 HOXD9P28356 352 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 GABRA5P31644 462 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 MC1RQ01726 317 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 TAF10Q12962 218 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ILKQ13418 452 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 CAMK2DQ13557 499 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SEC23BQ15437 767 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SYT14P1Q58G82 188 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 RNF219Q5W0B1 726 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF613Q6PF04 617 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 RAET1EQ8TD07 263 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 RAB8BQ92930 207 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 IFT22Q9H7X7 185 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF408Q9H9D4 720 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 THSD1Q9NS62 852 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 LYARQ9NX58 379 aaKnown RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SCP2D1Q9UJQ7 156 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ST3GAL5Q9UNP4 418 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 A0A1B0GVI7 797 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 TMEM229AB2RXF0 380 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 E9PQ18 207 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PRMT3O60678 531 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 CLDN7O95471 211 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 HLA-DQB1P01920 261 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SRPRAP08240 638 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ASMTP46597 345 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PITPNBP48739 271 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 DGKGP49619 791 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 CRYBB1P53674 252 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 LGALS3BPQ08380 585 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 NFATC2Q13469 925 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PIN1Q13526 163 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 DOC2AQ14183 400 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ELOAQ14241 798 aaKnown RBP7.23□□□□□ -1.25
BRCA1-201ENST00000352993 UPP1Q16831 310 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 ST3GAL2Q16842 350 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 SLC5A12Q1EHB4 618 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 TCTE1Q5JU00 501 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 LRRC70Q7Z2Q7 622 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 PLEKHH3Q7Z736 793 aa7.23□□□□□ -1.25
BRCA1-201ENST00000352993 KLBQ86Z14 1044 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms