RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 ITGA1P56199 1179 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 GPAT3Q53EU6 434 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 ZNF385BQ569K4 471 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 ANXA8L1Q5VT79 327 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 ERICH5Q6P6B1 374 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 ZNF621Q6ZSS3 439 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 ZNF767PQ75MW2 155 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 CCDC71Q8IV32 467 aaPredicted RBP17.64■□□□□ 0.42
SPNS1-204ENST00000352260 ELMOD2Q8IZ81 293 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 FAM109AQ8N4B1 249 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 OR52E1Q8NGJ3 308 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 CXorf40BQ96DE9 158 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 WDR92Q96MX6 357 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 PRAP1Q96NZ9 151 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 EPYCQ99645 322 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 RAB11FIP5Q9BXF6 653 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 MIR1-1HGQ9H1L0 117 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 NT5DC2Q9H857 520 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 ICKQ9UPZ9 632 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 PRELID1Q9Y255 219 aa17.64■□□□□ 0.42
SPNS1-204ENST00000352260 FEZF1A0PJY2 475 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 ANKDD1BA6NHY2 528 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 CLIC1O00299 241 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 EPN2O95208 641 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 KLK1P06870 262 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 ENGP17813 658 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 CYP4F2P78329 520 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 IL1RL1Q01638 556 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 IRF3Q14653 427 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 LEXMQ3ZCV2 418 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 FAM71E1Q6IPT2 247 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 IDO2Q6ZQW0 420 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 SERPINA11Q86U17 422 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 SLC9B2Q86UD5 537 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 ZFAND1Q8TCF1 268 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 HMGB4Q8WW32 186 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 MSANTD3Q96H12 275 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 SORBS1Q9BX66 1292 aaKnown RBP17.64■□□□□ 0.41
SPNS1-204ENST00000352260 MS4A8Q9BY19 250 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 MYNNQ9NPC7 610 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 SH3BP4Q9P0V3 963 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 NDRG2Q9UN36 371 aaKnown RBP17.64■□□□□ 0.41
SPNS1-204ENST00000352260 PCDHGA6Q9Y5G7 932 aa17.64■□□□□ 0.41
SPNS1-204ENST00000352260 SHOXO15266 292 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 ARHGEF9O43307 516 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 APBB3O95704 486 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 C9P02748 559 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 ALPPP05187 535 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 GGT2P36268 569 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 AP2S1P53680 142 aaPredicted RBP17.63■□□□□ 0.41
SPNS1-204ENST00000352260 CSNK1G2P78368 415 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 ASAH1Q13510 395 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 GPR155Q7Z3F1 870 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 ATG16L2Q8NAA4 619 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 PHF7Q9BWX1 381 aaPredicted RBP17.63■□□□□ 0.41
SPNS1-204ENST00000352260 BHLHE41Q9C0J9 482 aaPredicted RBP17.63■□□□□ 0.41
SPNS1-204ENST00000352260 PITHD1Q9GZP4 211 aaPredicted RBP17.63■□□□□ 0.41
SPNS1-204ENST00000352260 SLC22A4Q9H015 551 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 RACGAP1Q9H0H5 632 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 NIPAL2Q9H841 368 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 REEP1Q9H902 201 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 GIMAP4Q9NUV9 329 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 KLHL21Q9UJP4 597 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 ABCG2Q9UNQ0 655 aa17.63■□□□□ 0.41
SPNS1-204ENST00000352260 TEX51A0A1B0GUA7 166 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 ERVH48-1M5A8F1 160 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 POLR1CO15160 346 aaPredicted RBP17.62■□□□□ 0.41
SPNS1-204ENST00000352260 SEC14L5O43304 696 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 FURINP09958 794 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 ADORA3P0DMS8 318 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 HLA-DMAP28067 261 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 RFX2P48378 723 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 ALDH9A1P49189 494 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 TAS2R50P59544 299 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 MC1RQ01726 317 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 C2orf80Q0P641 193 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 PDE7AQ13946 482 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 KHDRBS2Q5VWX1 349 aaKnown RBP17.62■□□□□ 0.41
SPNS1-204ENST00000352260 GDPGP1Q6ZNW5 385 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 OR8H2Q8N162 312 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 DEPDC4Q8N2C3 294 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 LSM14AQ8ND56 463 aaKnown RBP17.62■□□□□ 0.41
SPNS1-204ENST00000352260 VPS37AQ8NEZ2 397 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 OR2A1Q8NGT9 310 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 TSACCQ96A04 125 aaPredicted RBP17.62■□□□□ 0.41
SPNS1-204ENST00000352260 BARD1Q99728 777 aaKnown RBP17.62■□□□□ 0.41
SPNS1-204ENST00000352260 C12orf10Q9HB07 376 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 SMURF1Q9HCE7 757 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 RASSF1Q9NS23 344 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 AASSQ9UDR5 926 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 TBC1D29Q9UFV1 150 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 KCNN3Q9UGI6 736 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 SAMHD1Q9Y3Z3 626 aaKnown RBP17.62■□□□□ 0.41
SPNS1-204ENST00000352260 PCDHB11Q9Y5F2 797 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 IGKV1-8A0A0C4DH67 115 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 LOC100506127A0A0U1RQW1 187 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 MYO1GB0I1T2 1018 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 RNASET2O00584 256 aaKnown RBP17.62■□□□□ 0.41
SPNS1-204ENST00000352260 PLPP1O14494 284 aa17.62■□□□□ 0.41
SPNS1-204ENST00000352260 OR3A3P47888 321 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms