RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 TREX1Q9NSU2 369 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 ABCB8Q9NUT2 735 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 C1orf109Q9NX04 203 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 SIDT1Q9NXL6 827 aaKnown RBP7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 SEC14L4Q9UDX3 406 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 IKZF3Q9UKT9 509 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 RUVBL1Q9Y265 456 aaKnown RBP7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 TRPV2Q9Y5S1 764 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 KLF2Q9Y5W3 355 aaPredicted RBP7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 HS3ST4Q9Y661 456 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 STON1Q9Y6Q2 735 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 U3KQ87 197 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 U3KQV3 271 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 SCN5AQ14524 2016 aa7.3□□□□□ -1.24
UBE2D3-204ENST00000349311 ALPK3Q96L96 1907 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 NUP205Q92621 2012 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 LINC00854A0A1B0GVQ3 168 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 GAGE12BA1L429 117 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 GAGE12HA6NDE8 117 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 WASHC1A8K0Z3 465 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 LACTBL1A8MY62 500 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 F2RL2O00254 374 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 GRM6O15303 877 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 SLC7A4O43246 635 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 SULT1B1O43704 296 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 NARSO43776 548 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 CACNG3O60359 315 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 DPM1O60762 260 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TSC22D2O75157 780 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 RECQL4O94761 1208 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 LGI1O95970 557 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 HLA-DQB1P01920 261 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ITGB1P05556 798 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 HMBSP08397 361 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 RRASP10301 218 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 KCNE1P15382 129 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF250P15622 560 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 CD1DP15813 335 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TSPAN8P19075 237 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 PXNP49023 591 aaPredicted RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 RPL34P49207 117 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 CCT3P49368 545 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 MAP2K6P52564 334 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TPI1P60174 286 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 RPP38P78345 283 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 NPRL3Q12980 569 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF79Q15937 498 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 BAK1Q16611 211 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 SMN1Q16637 294 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TATDN3Q17R31 274 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 WSCD2Q2TBF2 565 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 FLYWCH1Q4VC44 716 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 HSD17B12Q53GQ0 312 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TRIQKQ629K1 86 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 SAXO2Q658L1 398 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 PM20D1Q6GTS8 502 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ANKRD54Q6NXT1 300 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 FAHD1Q6P587 224 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TMEM81Q6P7N7 255 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 KLHL17Q6TDP4 642 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 CXCL17Q6UXB2 119 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 HSDL2Q6YN16 418 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 MED25Q71SY5 747 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 EIF3MQ7L2H7 374 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 DET1Q7L5Y6 550 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 RRM2BQ7LG56 351 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 KDELC2Q7Z4H8 507 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ISCA2Q86U28 154 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 FAM90A1Q86YD7 464 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TMC8Q8IU68 726 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ENTHD1Q8IYW4 607 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 PYROXD2Q8N2H3 581 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 FBXO39Q8N4B4 442 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 LRRC17Q8N6Y2 441 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 FAM86B1Q8N7N1 296 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF366Q8N895 744 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF557Q8N988 423 aaPredicted RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 C19orf18Q8NEA5 215 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 DENND6BQ8NEG7 585 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 DUSP18Q8NEJ0 188 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 NLGN4YQ8NFZ3 816 aaPredicted RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 OR56A4Q8NGH8 313 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 OR9Q1Q8NGQ5 310 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 HERVK_113Q902F9 699 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 ST8SIA4Q92187 359 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 GGHQ92820 318 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 DNASE1L2Q92874 299 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 NTAN1Q96AB6 310 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 FAM120BQ96EK7 910 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 PGLYRP2Q96PD5 576 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 FCRL5Q96RD9 977 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 VRK1Q99986 396 aaPredicted RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TBCDQ9BTW9 1192 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 THUMPD3Q9BV44 507 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 FICDQ9BVA6 458 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 TEX101Q9BY14 249 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 PPIL3Q9H2H8 161 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 NT5DC2Q9H857 520 aa7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 RBFOX1Q9NWB1 397 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-204ENST00000349311 CNOT2Q9NZN8 540 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms