RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 C9orf62Q8N4C0 152 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 LINC00471Q8N535 108 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 C12orf76Q8N812 135 aaPredicted RBP15.06■□□□□ 0
HMGA1-202ENST00000347617 OR2A12Q8NGT7 310 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 NFKBIDQ8NI38 313 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 TRMT61AQ96FX7 289 aaKnown RBP15.06■□□□□ 0
HMGA1-202ENST00000347617 KCNJ15Q99712 375 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 POLDIP3Q9BY77 421 aaKnown RBP15.06■□□□□ 0
HMGA1-202ENST00000347617 EMC7Q9NPA0 242 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 REV1Q9UBZ9 1251 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 MYOFQ9NZM1 2061 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 TRBC2A0A5B9 178 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 TMEM129A0AVI4 362 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 INMT-MINDY4F8WBC2 141 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 GPR39O43194 453 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 ALPIP09923 528 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 MAN2A2P49641 1150 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 WNT4P56705 351 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 ABATP80404 500 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 COL28A1Q2UY09 1125 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 LIPKQ5VXJ0 399 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 PAMR1Q6UXH9 720 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 GDPD4Q6W3E5 623 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 ATP6V1C2Q8NEY4 427 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 OR6K2Q8NGY2 324 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 FGF13Q92913 245 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 NACC2Q96BF6 587 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 MTERF3Q96E29 417 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 CHFRQ96EP1 664 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 FAM83CQ9BQN1 747 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 C1GALT1Q9NS00 363 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 MRPS18AQ9NVS2 196 aaKnown RBP15.05■□□□□ -0
HMGA1-202ENST00000347617 TAS2R7Q9NYW3 318 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 CLEC2DQ9UHP7 191 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 KCNE2Q9Y6J6 123 aa15.05■□□□□ -0
HMGA1-202ENST00000347617 PIPSLA2A3N6 862 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 GFYI3L273 518 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 OPN1SWP03999 348 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 POU1F1P28069 291 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 TIA1P31483 386 aaKnown RBP eCLIP15.04■□□□□ -07e-6■■■□□ 17.4
HMGA1-202ENST00000347617 GABRA5P31644 462 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 OR1E2P47887 323 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 XKP51811 444 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 PER3P56645 1201 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 CHRNA6Q15825 494 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.04■□□□□ -0
HMGA1-202ENST00000347617 CRTC1Q6UUV9 634 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 UNC5DQ6UXZ4 953 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 SLC37A3Q8NCC5 494 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 CDC26Q8NHZ8 85 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 ACOT12Q8WYK0 555 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 UFD1Q92890 307 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 RSPRY1Q96DX4 576 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 ZBED6CLQ96FA7 236 aaPredicted RBP15.04■□□□□ -0
HMGA1-202ENST00000347617 AIFM2Q9BRQ8 373 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 SLC35A5Q9BS91 424 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 KATNB1Q9BVA0 655 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 REEP4Q9H6H4 257 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 NARFLQ9H6Q4 476 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 FGF20Q9NP95 211 aaPredicted RBP15.04■□□□□ -0
HMGA1-202ENST00000347617 MCUBQ9NWR8 336 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 EXOSC1Q9Y3B2 195 aaKnown RBP15.04■□□□□ -0
HMGA1-202ENST00000347617 STON1Q9Y6Q2 735 aa15.04■□□□□ -0
HMGA1-202ENST00000347617 TRDV1A0A1B0GX56 115 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 PRAMEF25A6NGN4 478 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 CDK2AP1O14519 115 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 PLD2O14939 933 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 AKR7A2O43488 359 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 CLDN7O95471 211 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 ETFAP13804 333 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 POU2F1P14859 743 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 BPIP17213 487 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 CTRB1P17538 263 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 TNFRSF1BP20333 461 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 GKP32189 559 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 EVX1P49640 407 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 ATP12AP54707 1039 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 MXD1Q05195 221 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 RGS1Q08116 209 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 COX10Q12887 443 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 DSG2Q14126 1118 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 DOC2BQ14184 412 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 KLHL12Q53G59 568 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 CTRB2Q6GPI1 263 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 C22orf42Q6IC83 251 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 CNIH2Q6PI25 160 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 CD200R1LQ6Q8B3 271 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 FBXL6Q8N531 539 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 LRRC17Q8N6Y2 441 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 TMEM145Q8NBT3 493 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 OR8H1Q8NGG4 311 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 IL4I1Q96RQ9 567 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 HDHD5Q9BXW7 423 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 PRRG3Q9BZD7 231 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 BRD9Q9H8M2 597 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 CERS4Q9HA82 394 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 C11orf16Q9NQ32 467 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 DNAJC27Q9NZQ0 273 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 SLC6A14Q9UN76 642 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 SLC22A14Q9Y267 594 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms