RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 OR2B6P58173 313 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 VLDLRP98155 873 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 EFR3AQ14156 821 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 RCAN2Q14206 197 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 BCL7AQ4VC05 210 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 AFMIDQ63HM1 303 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 KCTD11Q693B1 232 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 RPL13AP3Q6NVV1 102 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 CARM1Q86X55 608 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 CDRT4Q8N9R6 151 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 FCGR1BQ92637 280 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 MS4A4EQ96PG1 132 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 TWSG1Q9GZX9 223 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 GEMIN8Q9NWZ8 242 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 DHRS13Q6UX07 377 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 CD320Q9NPF0 282 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 CUTCQ9NTM9 273 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 UPB1Q9UBR1 384 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 A0A0G2JPF8 293 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 HNRNPCL3B7ZW38 293 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 HAT1O14929 419 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 RPS17P08708 135 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 HNRNPCL4P0DMR1 293 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 ICAM2P13598 275 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 HSD11B2P80365 405 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 COQ5Q5HYK3 327 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 GPR107Q5VW38 600 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 C19orf47Q8N9M1 422 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 TMBIM1Q969X1 311 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 EHD1Q9H4M9 534 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 MRPL39Q9NYK5 338 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 NAALAD2Q9Y3Q0 740 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 FAUP35544 74 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 GMPRP36959 345 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 RRADP55042 308 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 PYDC2Q56P42 97 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 PATE1Q8WXA2 126 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 TP53INP1Q96A56 240 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 ZNF559Q9BR84 538 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 ORAI3Q9BRQ5 295 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 MTHFD2LQ9H903 347 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 TCF7L1Q9HCS4 588 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 NELFEP18615 380 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 NR0B1P51843 470 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 FOXK1P85037 733 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 KHDC1Q4VXA5 237 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 TPRG1LQ5T0D9 272 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 BLOC1S3Q6QNY0 202 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 ACOT4Q8N9L9 421 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 OR14L1PQ8NHC6 308 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 DOHHQ9BU89 302 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 DAPK2Q9UIK4 370 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 PAMR1Q6UXH9 720 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 MFSD9Q8NBP5 474 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 APIPQ96GX9 242 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 TSSK6Q9BXA6 273 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 POLDIP3Q9BY77 421 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 ANXA2P2A6NMY6 339 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 G3V2L1 256 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 YY2O15391 372 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 ANXA2P07355 339 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 DDCP20711 480 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 EEF1A2Q05639 463 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 MERTKQ12866 999 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 Q6ZNB5 142 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 SP140LQ9H930 580 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 CACNA1HO95180 2353 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 IGLV3-25P01717 112 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 CCNOP22674 350 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 PRDX3P30048 256 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 ECHS1P30084 290 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 C9orf43Q8TAL5 461 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 COPS4Q9BT78 406 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 TNFRSF10DQ9UBN6 386 aa15.56■□□□□ 0.08
SMARCA4-201ENST00000344626 EI24O14681 340 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 BNIP3Q12983 259 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 LETMD1Q6P1Q0 360 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 LINC00696Q6ZRV3 163 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 ZNF676Q8N7Q3 588 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 WSB2Q9NYS7 404 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 RSL24D1Q9UHA3 163 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 NXT1Q9UKK6 140 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 PCDHB14Q9Y5E9 798 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 SPAG17Q6Q759 2223 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 ABOP16442 354 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 UGT2B7P16662 529 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 PEX2P28328 305 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 RHDQ02161 417 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 RBPJQ06330 500 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 ZNF100Q8IYN0 542 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 OR52N2Q8NGI0 321 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 S100ZQ8WXG8 99 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 ECHDC3Q96DC8 303 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 CPNE2Q96FN4 548 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 ZNF451Q9Y4E5 1061 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 NME7Q9Y5B8 376 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 FLRT2O43155 660 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 GPLD1P80108 840 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 HSDL2Q6YN16 418 aa15.55■□□□□ 0.08
SMARCA4-201ENST00000344626 OR9A4Q8NGU2 314 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms