RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 DMPKQ09013 629 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 HYAL2Q12891 473 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 IRF3Q14653 427 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 ZNF776Q68DI1 518 aaPredicted RBP14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 PODNL1Q6PEZ8 512 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 KRT73Q86Y46 540 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 TCEANCQ8N8B7 351 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 OR2L3Q8NG85 312 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 CNRIP1Q96F85 164 aaPredicted RBP14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 MGLLQ99685 303 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 MROQ9BYG7 248 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 PITHD1Q9GZP4 211 aaPredicted RBP14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 A4GNTQ9UNA3 340 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 MGAT4BQ9UQ53 548 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 CA5BQ9Y2D0 317 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 DSPPQ9NZW4 1301 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 METTL15A6NJ78 407 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 ISM1B1AKI9 464 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 DSCR3O14972 297 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 RNGTTO60942 597 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 DNTTP04053 509 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 DRD2P14416 443 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 CLDN2P57739 230 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 FBXO43Q4G163 708 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 PLAG1Q6DJT9 500 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 CASP12Q6UXS9 341 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 OR4E2Q8NGC2 313 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 OR6T1Q8NGN1 323 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 TIMM29Q9BSF4 260 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 FNDC11Q9BVV2 318 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 FGF22Q9HCT0 170 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 TVP23BQ9NYZ1 205 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 CLEC2DQ9UHP7 191 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 GPC6Q9Y625 555 aaPredicted RBP14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 GPR89AB7ZAQ6 455 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 FRS3O43559 492 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 MPZL2O60487 215 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 GPR89BP0CG08 455 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 SOX3P41225 446 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 KHKP50053 298 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 TUBA1BP68363 451 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 TEKQ02763 1124 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 CD300CQ08708 224 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 FUT5Q11128 374 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 RPE65Q16518 533 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 ABHD17CQ6PCB6 329 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 TUBA1AQ71U36 451 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 ZNF367Q7RTV3 350 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 IQCHQ86VS3 1027 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC34A3Q8N130 599 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D19Q8N5T2 526 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 TTLQ8NG68 377 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 ENTPD4Q9Y227 616 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 ASB4Q9Y574 426 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 SH3D21A4FU49 640 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 EML2O95834 649 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 ATP5A1P25705 553 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 CD40LGP29965 261 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 ITPRIPL2Q3MIP1 535 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 TMEM35AQ53FP2 167 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 NUDT18Q6ZVK8 323 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 AMER2Q8N7J2 671 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 SUN3Q8TAQ9 357 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 RASSF5Q8WWW0 418 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 CRELD1Q96HD1 420 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 C1QTNF2Q9BXJ5 285 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 PBX4Q9BYU1 374 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 EXOSC4Q9NPD3 245 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 PRDM7Q9NQW5 492 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 TAS2R7Q9NYW3 318 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC17A4Q9Y2C5 497 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 NTN1O95631 604 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 EPPINO95925 133 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 AK4P27144 223 aaPredicted RBP14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 UGT2B10P36537 528 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 MC3RP41968 323 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 SEPHS1P49903 392 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 ERVK-21P61565 698 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 PPP2CBP62714 309 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 TRA2BP62995 288 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 PPP2CAP67775 309 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 ILKQ13418 452 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 ZIC1Q15915 447 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 KBTBD8Q8NFY9 601 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 OR9A2Q8NGT5 310 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 KAT2AQ92830 837 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 NEURL2Q9BR09 285 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 APOOQ9BUR5 198 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 CDCA4Q9BXL8 241 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 APOBEC3BQ9UH17 382 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 PCDHGA3Q9Y5H0 932 aa14.04□□□□□ -0.16
VIPAS39-202ENST00000343765 DOCK8Q8NF50 2099 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 ARHGAP33O14559 1287 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 TBX1O43435 398 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 KIAA0513O60268 411 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 OXSR1O95747 527 aaPredicted RBP14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 MAGP20916 626 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 LBX1P52954 281 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 OLR1P78380 273 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 MLC1Q15049 377 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms