RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 C9orf43Q8TAL5 461 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 MIPOL1Q8TD10 442 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 ADAMTS15Q8TE58 950 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 NAT14Q8WUY8 206 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 THAP4Q8WY91 577 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 TANKQ92844 425 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 ACPTQ9BZG2 426 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 XKR8Q9H6D3 395 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 HHATLQ9HCP6 504 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 SH2D2AQ9NP31 389 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 TMEM160Q9NX00 188 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 SLC39A1Q9NY26 324 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 PLAGL1Q9UM63 463 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 DMDP11532 3685 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 LOC105369274A0A096LPK9 316 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 LOC102723532A0A0G2JNH3 316 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 A0A1W2PPL8 197 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 CPED1A4D0V7 1026 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 FAM171A2A8MVW0 826 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 F8W735 103 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 AZIN1O14977 448 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 PROM1O43490 865 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 KIF1CO43896 1103 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 EDF1O60869 148 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 LYPLA1O75608 230 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 STK17BO94768 372 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 SIX3O95343 332 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 KRT6AP02538 564 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 KRT6BP04259 564 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 F7P08709 466 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 PRPS2P11908 318 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 DDX5P17844 614 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 CDH3P22223 829 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 HIST1H1TP22492 207 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 RPL3P39023 403 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 KRT6CP48668 564 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 EFNA3P52797 238 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 SEC24CP53992 1094 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 LGALS4P56470 323 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 DCDP81605 110 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 MALLQ13021 153 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 CHIT1Q13231 466 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 TRIM25Q14258 630 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 TSTQ16762 297 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 GSTA3Q16772 222 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 C18orf21Q32NC0 220 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 SPATS1Q496A3 300 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 OR4C11Q6IEV9 310 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 RPUSD3Q6P087 351 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 MTFR2Q6P444 385 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 TMEM64Q6YI46 380 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 CXXC5Q7LFL8 322 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 MAVSQ7Z434 540 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 CUZD1Q86UP6 607 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 LYSMD2Q8IV50 215 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 OR4N4Q8N0Y3 316 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 SLC15A4Q8N697 577 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 TEX9Q8N6V9 391 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 MORN4Q8NDC4 146 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 ZNF740Q8NDX6 193 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 OR7G1Q8NGA0 311 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 HUS1BQ8NHY5 278 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 SFXN5Q8TD22 340 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 MGARPQ8TDB4 240 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 NCSTNQ92542 709 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 IMMP1LQ96LU5 166 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 PPP3R2Q96LZ3 170 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 ZNF681Q96N22 645 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 OR6C1Q96RD1 312 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 WDR77Q9BQA1 342 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 IQCGQ9H095 443 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 NOL11Q9H8H0 719 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 EVA1AQ9H8M9 152 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 TNFRSF12AQ9NP84 129 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 PFDN4Q9NQP4 134 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 KRT84Q9NSB2 600 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 ACSS1Q9NUB1 689 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 KCND3Q9UK17 655 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 DAPP1Q9UN19 280 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 MRPS2Q9Y399 296 aaKnown RBP3.27□□□□□ -1.89
CCDC66-202ENST00000341455 DNAJC15Q9Y5T4 150 aa3.27□□□□□ -1.89
CCDC66-202ENST00000341455 GOLGA6L10A6NI86 522 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 TRPC5OSA6NMA1 111 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 DBX1A6NMT0 343 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 TMEM150CB9EJG8 249 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 SCRG1O75711 98 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 PDYNP01213 254 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 IGKV3-11P04433 115 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 NGFRP08138 427 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 ABCB1P08183 1280 aaPredicted RBP3.26□□□□□ -1.89
CCDC66-202ENST00000341455 ZCCHC18P0CG32 403 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 CREB1P16220 341 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 ZNF28P17035 718 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 PRDX6P30041 224 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 SSTR4P31391 388 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 TIA1P31483 386 aaKnown RBP eCLIP3.26□□□□□ -1.89
CCDC66-202ENST00000341455 ASMTP46597 345 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 AVPR1BP47901 424 aa3.26□□□□□ -1.89
CCDC66-202ENST00000341455 RPL14P50914 215 aaKnown RBP3.26□□□□□ -1.89
CCDC66-202ENST00000341455 CCNG1P51959 295 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms