RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 GSTM5P46439 218 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 ZNF763Q0D2J5 394 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 MAP4K2Q12851 820 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 DUSP8Q13202 625 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 ART3Q13508 389 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 CEBPEQ15744 281 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 MAPKAPK3Q16644 382 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 PRSS53Q2L4Q9 553 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 NOXRED1Q6NXP6 359 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 FAM111BQ6SJ93 734 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.23□□□□□ -0.13
VAPA-201ENST00000340541 GPALPP1Q8IXQ4 340 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 CLYBLQ8N0X4 340 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 ZNF441Q8N8Z8 693 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 ASB15Q8WXK1 588 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 CTHRC1Q96CG8 243 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 METTL2AQ96IZ6 378 aaKnown RBP14.23□□□□□ -0.13
VAPA-201ENST00000340541 FCRL1Q96LA6 429 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 WWTR1Q9GZV5 400 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 MYNNQ9NPC7 610 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.23□□□□□ -0.13
VAPA-201ENST00000340541 MAT2BQ9NZL9 334 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 ZNF639Q9UID6 485 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 UTS2RQ9UKP6 389 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 PSME2Q9UL46 239 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 KLF2Q9Y5W3 355 aaPredicted RBP14.23□□□□□ -0.13
VAPA-201ENST00000340541 OR6C76A6NM76 312 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 A8MVJ9 347 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 SLC28A1O00337 649 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 TM9SF1O15321 606 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 LINC00032P0C843 101 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 NT5EP21589 574 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 TACR1P25103 407 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 HEPACAMQ14CZ8 416 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 LTB4RQ15722 352 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 RNFT1Q5M7Z0 435 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 SH2D4BQ5SQS7 431 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 FAM71E1Q6IPT2 247 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 IL20RBQ6UXL0 311 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 GFRALQ6UXV0 394 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 FJX1Q86VR8 437 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 NUDCD3Q8IVD9 361 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 SIAH3Q8IW03 269 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 SULF2Q8IWU5 870 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 LRRC25Q8N386 305 aaPredicted RBP14.22□□□□□ -0.13
VAPA-201ENST00000340541 CPSF7Q8N684 471 aaKnown RBP14.22□□□□□ -0.13
VAPA-201ENST00000340541 SIMC1Q8NDZ2 872 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 TWIST2Q8WVJ9 160 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 MARVELD3Q96A59 401 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 TMEM125Q96AQ2 219 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 OR10A5Q9H207 317 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 LRTM1Q9HBL6 345 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 EML4Q9HC35 981 aaKnown RBP14.22□□□□□ -0.13
VAPA-201ENST00000340541 DEPPQ9NTK1 212 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 HPF1Q9NWY4 346 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 C1orf109Q9NX04 203 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 EHD3Q9NZN3 535 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 ZDHHC2Q9UIJ5 367 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 ABCA12Q86UK0 2595 aa14.22□□□□□ -0.13
VAPA-201ENST00000340541 WDR91A4D1P6 747 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 PIP5K1BO14986 540 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 LSM1O15116 133 aaKnown RBP14.21□□□□□ -0.13
VAPA-201ENST00000340541 BIRC5O15392 142 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 RGS14O43566 566 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 ITM2AO43736 263 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 SEC22BO75396 215 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 NEFHP12036 1026 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 DDCP20711 480 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 ZNF791Q3KP31 576 aaPredicted RBP14.21□□□□□ -0.13
VAPA-201ENST00000340541 RFTN2Q52LD8 501 aaPredicted RBP14.21□□□□□ -0.13
VAPA-201ENST00000340541 ZNF628Q5EBL2 1059 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 XKR7Q5GH72 579 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 OPN5Q6U736 354 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 SLC29A4Q7RTT9 530 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 VWA5B2Q8N398 1253 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 PSD4Q8NDX1 1056 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 ADCY4Q8NFM4 1077 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 OR7G1Q8NGA0 311 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 AGR3Q8TD06 166 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 ADIPOR1Q96A54 375 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 EXOSC8Q96B26 276 aaKnown RBP14.21□□□□□ -0.13
VAPA-201ENST00000340541 EGLN2Q96KS0 407 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 GAL3ST4Q96RP7 486 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 ZNF395Q9H8N7 513 aaPredicted RBP14.21□□□□□ -0.13
VAPA-201ENST00000340541 SH2D2AQ9NP31 389 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 SLC35C2Q9NQQ7 365 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 TAS2R7Q9NYW3 318 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 SUCOQ9UBS9 1254 aaKnown RBP14.21□□□□□ -0.13
VAPA-201ENST00000340541 ERVK-11Q9UQG0 969 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 DTX4Q9Y2E6 619 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 WBP11Q9Y2W2 641 aaKnown RBP14.21□□□□□ -0.13
VAPA-201ENST00000340541 KLF13Q9Y2Y9 288 aaPredicted RBP14.21□□□□□ -0.13
VAPA-201ENST00000340541 ZNF780BQ9Y6R6 833 aa14.21□□□□□ -0.13
VAPA-201ENST00000340541 EXPH5Q8NEV8 1989 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 A0A0G2JMM0 328 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 C2orf92A0A1B0GVN3 265 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 A0A1W2PPB8 328 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 A0A1W2PRS3 328 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 PINLYPA6NC86 204 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 KIR3DP1A8MWS1 328 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms