RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SSR2P43308 183 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 AVPR1BP47901 424 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 QPRTQ15274 297 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 NDUFA5Q16718 116 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 PLET1Q6UQ28 207 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 CCDC116Q8IYX3 515 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 CADM2Q8N3J6 435 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 OR52I1Q8NGK6 324 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 JPH3Q8WXH2 748 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-201ENST00000340437 TFGQ92734 400 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-201ENST00000340437 RNFT2Q96EX2 444 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 PLA2G12AQ9BZM1 189 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 OR2B2Q9GZK3 357 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 SLC22A4Q9H015 551 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 MGAT4BQ9UQ53 548 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 CLCA2Q9UQC9 943 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 NPIPB8E9PQR5 432 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 B4GALT2O60909 372 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 RPL3P39023 403 aaKnown RBP13.62□□□□□ -0.23
CPSF7-201ENST00000340437 NCBP2P52298 156 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■■□□□ 12.6
CPSF7-201ENST00000340437 PCBP3P57721 371 aaKnown RBP13.62□□□□□ -0.23
CPSF7-201ENST00000340437 RAB8AP61006 207 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 GPR19Q15760 415 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF791Q3KP31 576 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-201ENST00000340437 FNDC3BQ53EP0 1204 aaKnown RBP13.62□□□□□ -0.23
CPSF7-201ENST00000340437 TCEAL5Q5H9L2 206 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 TECPR1Q7Z6L1 1165 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 ZER1Q7Z7L7 766 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 SLC30A8Q8IWU4 369 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 OR6T1Q8NGN1 323 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 SMPDL3AQ92484 453 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 IGFLR1Q9H665 355 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 HCN2Q9UL51 889 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 NTNG1Q9Y2I2 539 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF670-ZNF695F2Z2N8 137 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 QSOX1O00391 747 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 HMGN4O00479 90 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 CAPN5O15484 640 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-201ENST00000340437 HPGDSO60760 199 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 GPR50Q13585 617 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 KRT33BQ14525 404 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 DDI2Q5TDH0 399 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 ASB18Q6ZVZ8 466 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 VN1R5Q7Z5H4 357 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 CAMKMTQ7Z624 323 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 LAS2Q8IYD9 372 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 NANOGP1Q8N7R0 232 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 OR4F15Q8NGB8 312 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 TM4SF18Q96CE8 201 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF689Q96CS4 500 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-201ENST00000340437 KCTD7Q96MP8 289 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 SRRQ9GZT4 340 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 PI15O43692 258 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 PCCBP05166 539 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 CSF3P09919 207 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 GIPRP48546 466 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 TAS2R41P59536 307 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 ILKQ13418 452 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 NUS1Q96E22 293 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 SLC35G5Q96KT7 338 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 ZSWIM3Q96MP5 696 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 FRMD6Q96NE9 622 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 TEFMQ96QE5 360 aaKnown RBP13.62□□□□□ -0.23
CPSF7-201ENST00000340437 WACQ9BTA9 647 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 HDHD2Q9H0R4 259 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 USP34Q70CQ2 3546 aa13.62□□□□□ -0.23
CPSF7-201ENST00000340437 A0A1W2PS29 197 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 TMPRSS11DO60235 418 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 RB1P06400 928 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SLC2A2P11168 524 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 PPP2R1BP30154 601 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SLC30A6Q6NXT4 461 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 TMC8Q8IU68 726 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF296Q8WUU4 475 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 CHAC2Q8WUX2 184 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 PDXPQ96GD0 296 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 C16orf58Q96GQ5 468 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 NDRG2Q9UN36 371 aaKnown RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SERTM1A2A2V5 107 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 PLOD3O60568 738 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 FGF18O76093 207 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 RAB36O95755 333 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 CTSAP10619 480 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 WDR5P61964 334 aaKnown RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 RHAGQ02094 409 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 P2RY14Q15391 338 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SYT14P1Q58G82 188 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SLX4IPQ5VYV7 408 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF770Q6IQ21 691 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SMARCD3Q6STE5 483 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 RD3Q7Z3Z2 195 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 ANKRD53Q8N9V6 530 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 GOT1L1Q8NHS2 421 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 FAM46AQ96IP4 442 aaKnown RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 TAPBPLQ9BX59 468 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 TRBV23OR9-2A0A075B6M9 112 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 FAM183AA6NL82 134 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms