RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NRBP2Q9NSY0 501 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 ACSS1Q9NUB1 689 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 PLCXD1Q9NUJ7 323 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 C1orf109Q9NX04 203 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 MGAT4CQ9UBM8 478 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 POFUT2Q9Y2G5 429 aa9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 MAFBQ9Y5Q3 323 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-201ENST00000339488 NUP205Q92621 2012 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 A0A1B0GVI7 797 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PLSCR5A0PG75 271 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 MCRIP1C9JLW8 97 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM227AF5H4B4 570 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 FZD7O75084 574 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 ENTPD6O75354 484 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 RBBP9O75884 186 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 HCKP08631 526 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF44P15621 663 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 CYP2B6P20813 491 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PSMD4P55036 377 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PPP3R1P63098 170 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 SRSF3P84103 164 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 HTR4Q13639 388 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PPA1Q15181 289 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 TRAM1Q15629 374 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 DPYSL2Q16555 572 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 MAPKAPK3Q16644 382 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF660Q6AZW8 331 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PLAG1Q6DJT9 500 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 OVOS1Q6IE37 1185 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 FAHD1Q6P587 224 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 KIAA1143Q96AT1 154 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 L3HYPDHQ96EM0 354 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 OR2M2Q96R28 347 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 INPP5KQ9BT40 448 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 BRINP2Q9C0B6 783 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 MYOZ2Q9NPC6 264 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PTTG3PQ9NZH4 202 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 SHROOM3Q8TF72 1996 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PRR23D1E9PI22 279 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 H7C0S8 307 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 SGK494L7N484 410 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 CACNB4O00305 520 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 DHX15O43143 795 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 FGF4P08620 206 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 IGFBP1P08833 259 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 UCHL1P09936 223 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 OR8U8P0C7N1 319 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 EBLN1P0CF75 366 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PRR23D2P0DMB1 279 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 GABRA1P14867 456 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 BPIP17213 487 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 NFYAP23511 347 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 ARL4AP40617 200 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 NR0B1P51843 470 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 ILKQ13418 452 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 SYTL3Q4VX76 610 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 RFTN2Q52LD8 501 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 PYY3Q5JQD4 70 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 OR2G6Q5TZ20 316 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 TMUB2Q71RG4 321 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 SPATA19Q7Z5L4 167 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 VSIG10LQ86VR7 867 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 GPR135Q8IZ08 494 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 HDDC3Q8N4P3 179 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 ATPAF2Q8N5M1 289 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 ZSCAN1Q8NBB4 408 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 OR8J3Q8NGG0 315 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 TRIM62Q9BVG3 475 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 GSDMCQ9BYG8 508 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 DPAGT1Q9H3H5 408 aa9.17□□□□□ -0.94
PTCHD4-201ENST00000339488 QSER1Q2KHR3 1735 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 C2orf92A0A1B0GVN3 265 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 FOXE1O00358 373 aaPredicted RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 MDM4O15151 490 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 CACNG3O60359 315 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 CDC123O75794 336 aaPredicted RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 PEX11BO96011 259 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 F2P00734 622 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 IL1AP01583 271 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 JCHAINP01591 159 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 NOS2P35228 1153 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 STK19P49842 368 aaPredicted RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 MVDP53602 400 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 RPL38P63173 70 aaKnown RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 E2F1Q01094 437 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 ELAVL2Q12926 359 aaKnown RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 NCF4Q15080 339 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 AARDQ4LEZ3 155 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 ATAT1Q5SQI0 421 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 GSG1LQ6UXU4 331 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 HSDL2Q6YN16 418 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 Q6ZSR9 355 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 USP30Q70CQ3 517 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 DDX53Q86TM3 631 aaKnown RBP9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 PIH1D2Q8WWB5 315 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.949e-7■■■□□ 17.1
PTCHD4-201ENST00000339488 RFT1Q96AA3 541 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 ATF6BQ99941 703 aa9.16□□□□□ -0.94
PTCHD4-201ENST00000339488 NAA11Q9BSU3 229 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms