RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CMTM6Q9NX76 183 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 MAT2BQ9NZL9 334 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 C19orf25Q9UFG5 118 aaPredicted RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 C3orf18Q9UK00 162 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 ACSL6Q9UKU0 697 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 C19orf53Q9UNZ5 99 aaPredicted RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 CDRT15L2A8MXV6 281 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 C21orf140B9A014 251 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 BCAS2O75934 225 aaPredicted RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 ME2P23368 584 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 EMP2P54851 167 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 RGNQ15493 299 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 LTB4RQ15722 352 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 LCN10Q6JVE6 187 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 SZRD1Q7Z422 152 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 LAPTM4BQ86VI4 370 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 PRSS58Q8IYP2 241 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 ADCY4Q8NFM4 1077 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 OR7G2Q8NG99 324 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 OR2Y1Q8NGV0 311 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 OR5AK3PQ8NH89 298 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 OR14A16Q8NHC5 309 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 KAT2AQ92830 837 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 DAZLQ92904 295 aaKnown RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 TSLPQ969D9 159 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 RNF31Q96EP0 1072 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 SPTBN4Q9H254 2564 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 MUC13Q9H3R2 512 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 IKZF5Q9H5V7 419 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 EPS8L2Q9H6S3 715 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 SUCOQ9UBS9 1254 aaKnown RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 CD300AQ9UGN4 299 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 CLCA3PQ9Y6N3 262 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 TEX51A0A1B0GUA7 166 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 PRORSD1PA6NEY8 169 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 CNOT3O75175 753 aaKnown RBP13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 COQ9O75208 318 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 ALOX12BO75342 701 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 SOX30O94993 753 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 MRPS35P82673 323 aaKnown RBP13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 LIPEQ05469 1076 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 BNIP2Q12982 314 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 CEACAM7Q14002 265 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 CYP51A1Q16850 503 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 FHL5Q5TD97 284 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 FAM199XQ6PEV8 388 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 C6orf120Q7Z4R8 191 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 MIPOL1Q8TD10 442 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 FBXL20Q96IG2 436 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 KCTD14Q9BQ13 255 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 TRIM8Q9BZR9 551 aa13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 SOX17Q9H6I2 414 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-202ENST00000339255 DCDC2BA2VCK2 349 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 OR2W5A6NFC9 320 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 C17orf105B2RV13 164 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 UPK1AO00322 258 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 PRAMEF2O60811 474 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 CIB2O75838 187 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 KLF7O75840 302 aaPredicted RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 PSMG1O95456 288 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 IGHEP01854 428 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 BMP2P12643 396 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 TNNI3P19429 210 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 FOLR3P41439 243 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 STAT5AP42229 794 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 GSK3BP49841 420 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 KHKP50053 298 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 MVDP53602 400 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 MGAT2Q10469 447 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 SELPLGQ14242 412 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 ZCCHC12Q6PEW1 402 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 SHISA6Q6ZSJ9 500 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 TIPARPQ7Z3E1 657 aaKnown RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 NET1Q7Z628 596 aaPredicted RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 CALHM3Q86XJ0 350 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 RNF130Q86XS8 419 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 TMEM151BQ8IW70 566 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 OR2T12Q8NG77 320 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 OR7G1Q8NGA0 311 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 OR10A6Q8NH74 314 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 PNPT1Q8TCS8 783 aaKnown RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 UTP4Q969X6 686 aaKnown RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 NACC2Q96BF6 587 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 PPWD1Q96BP3 646 aaKnown RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 CCDC124Q96CT7 223 aaKnown RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 ASB9Q96DX5 294 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 REXO5Q96IC2 774 aaKnown RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 CLPTM1LQ96KA5 538 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 SLC35G5Q96KT7 338 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 GPR87Q9BY21 358 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 AKIRIN1Q9H9L7 192 aaPredicted RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 THSD1Q9NS62 852 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 GPATCH2Q9NW75 528 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 SLC7A8Q9UHI5 535 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 ZNF639Q9UID6 485 aa13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 FAF1Q9UNN5 650 aaPredicted RBP13.57□□□□□ -0.24
NIPAL3-202ENST00000339255 FAM220BPB1ANY3 271 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms