RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SIRT6Q8N6T7 355 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 OR8J2Q8NGG1 315 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 SUN3Q8TAQ9 357 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 PSMF1Q92530 271 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 TM9SF4Q92544 642 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 KAT2AQ92830 837 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 CIDECQ96AQ7 238 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 CTHRC1Q96CG8 243 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ABHD17AQ96GS6 310 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 MARK4Q96L34 752 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ELAC2Q9BQ52 826 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 OR10A5Q9H207 317 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 CDCP1Q9H5V8 836 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 CLMPQ9H6B4 373 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF552Q9H707 407 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 C3orf14Q9HBI5 128 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 MAT2BQ9NZL9 334 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 PRODH2Q9UF12 536 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF639Q9UID6 485 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF451Q9Y4E5 1061 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ANKRD11Q6UB99 2663 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 A0A087WV62 115 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 C2orf92A0A1B0GVN3 265 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 FAM234BA2RU67 622 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 HRKO00198 91 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 FCHO1O14526 889 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 IFI6P09912 130 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 CT62P0C5K7 136 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 FAM87AP0C7U9 286 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 S1PR1P21453 382 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 GPX3P22352 226 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 SSTR4P31391 388 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 MRPL19P49406 292 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 POLR2JP52435 117 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 SLC37A1P57057 533 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 RNF4P78317 190 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 LRRC74AQ0VAA2 488 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 HSPB3Q12988 150 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 MFAP5Q13361 173 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 SQLEQ14534 574 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 LTB4RQ15722 352 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 MPEG1Q2M385 716 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 FAM174BQ3ZCQ3 159 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 ACER2Q5QJU3 275 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 OR4F3Q6IEY1 312 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 CGB2Q6NT52 195 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 TCTN3Q6NUS6 607 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 PAOXQ6QHF9 649 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 SPATA21Q7Z572 469 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF321PQ8N8H1 164 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 C9orf43Q8TAL5 461 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 NUDT8Q8WV74 236 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 ELP4Q96EB1 424 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 MAGED4Q96JG8 741 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 OR52E6Q96RD3 313 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 SMAD5Q99717 465 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 FAM107BQ9H098 131 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 EPS8L2Q9H6S3 715 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 FAM120CQ9NX05 1096 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 TAS2R9Q9NYW1 312 aa11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 COPG1Q9Y678 874 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-202ENST00000337841 DYTNA2CJ06 578 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 RNASET2O00584 256 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 EMC8O43402 210 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 PRAMEF2O60811 474 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 COQ9O75208 318 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 CPSF4O95639 269 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 PGRP06401 933 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 EFNA1P20827 205 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 DRD4P21917 467 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 PTGER1P34995 402 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 DGKQP52824 942 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 KCNK10P57789 538 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 MLF1P58340 268 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 DCAF7P61962 342 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 MRPS35P82673 323 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 EXOSC7Q15024 291 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 SPDYE7PQ495Y7 208 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 AGKQ53H12 422 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 SPANXN4Q5MJ08 99 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 B3GNTL1Q67FW5 361 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 FCRLBQ6BAA4 426 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 TMEM107Q6UX40 140 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 LINC00696Q6ZRV3 163 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 ZADH2Q8N4Q0 377 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 AMER2Q8N7J2 671 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF615Q8N8J6 731 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 EXD3Q8N9H8 876 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 LSM14AQ8ND56 463 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 OR52R1Q8NGF1 315 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 NUBPLQ8TB37 319 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 THAP3Q8WTV1 239 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 TP53INP1Q96A56 240 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 TEX37Q96LM6 180 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 UBL7Q96S82 380 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 EPN3Q9H201 632 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 RMND5AQ9H871 391 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 SLAMF7Q9NQ25 335 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 DDX18Q9NVP1 670 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms