RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TBC1D23Q9NUY8 699 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 TVP23BQ9NYZ1 205 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CARD8Q9Y2G2 431 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 HCN4Q9Y3Q4 1203 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CELSR3Q9NYQ7 3312 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 OR2A25A4D2G3 310 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 AIREO43918 545 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CTSVO60911 334 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CDC123O75794 336 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 ADH1BP00325 375 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ADORA3P0DMS8 318 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 BMP4P12644 408 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CXCR2P25025 360 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ATP5A1P25705 553 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 CTHP32929 405 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 GRK3P35626 688 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 SEPHS1P49903 392 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 SH3BGRP55822 239 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 ALDH6A1Q02252 535 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 CHRNEQ04844 493 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 COLEC12Q5KU26 742 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 Q6ZS52 159 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ANKRD13BQ86YJ7 626 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CENPSQ8N2Z9 138 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 DNAJC5GQ8N7S2 189 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 RHOXF1Q8NHV9 184 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 WDR36Q8NI36 951 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 ZNF675Q8TD23 568 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 TMEM203Q969S6 136 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 YIPF6Q96EC8 236 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ZHX1-C8orf76Q96EF9 292 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 C1QTNF2Q9BXJ5 285 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 GABARAPL3Q9BY60 117 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 PELI2Q9HAT8 420 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 EXOSC4Q9NPD3 245 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 PRDM7Q9NQW5 492 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 NAALAD2Q9Y3Q0 740 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 FREM2Q5SZK8 3169 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 FANCMQ8IYD8 2048 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 OR6C74A6NCV1 312 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 ZNF701M0R085 212 aaPredicted RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 MAN2B1O00754 1011 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 JUNDP17535 347 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 NDUFV2P19404 249 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 IL18R1Q13478 541 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 INAQ16352 499 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 TSTQ16762 297 aaKnown RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 DCST1Q5T197 706 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 ABHD17CQ6PCB6 329 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 PODNL1Q6PEZ8 512 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 DHRS4L2Q6PKH6 230 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 RTL10Q7L3V2 364 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 AMIGO1Q86WK6 493 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 PSMA8Q8TAA3 256 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 SH3YL1Q96HL8 342 aaPredicted RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 PITX2Q99697 317 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 PLA2G12AQ9BZM1 189 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 TPK1Q9H3S4 243 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 SRMSQ9H3Y6 488 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 GPN2Q9H9Y4 310 aaPredicted RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 GIN1Q9NXP7 522 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 ACSL5Q9ULC5 683 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 POFUT2Q9Y2G5 429 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 PIAS3Q9Y6X2 628 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 TNRC18O15417 2968 aaPredicted RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 TCRBV21S2A2A0A5A6 115 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 SH3PXD2BA1X283 911 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 CLCA1A8K7I4 914 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 ZW10O43264 779 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 PLRG1O43660 514 aaKnown RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 DNAJB5O75953 348 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 GABARAPO95166 117 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 ACADMP11310 421 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 CBLP22681 906 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 NTSP30990 170 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 VASPP50552 380 aaPredicted RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 HNRNPFP52597 415 aaKnown RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 CRISP1P54107 249 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 ZNF829Q3KNS6 432 aaPredicted RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 ARMCX4Q5H9R4 360 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 KIAA1161Q6NSJ0 714 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 PRSS48Q7RTY5 328 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 VN1R4Q7Z5H5 301 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 METTL27Q8N6F8 245 aaPredicted RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 AMER2Q8N7J2 671 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 ZFP41Q8N8Y5 198 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 SLC16A11Q8NCK7 471 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 METTL2AQ96IZ6 378 aaKnown RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 MRGPRX1Q96LB2 322 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 BMFQ96LC9 184 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 OR2M4Q96R27 311 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 KCNS3Q9BQ31 491 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 DCSTAMPQ9H295 470 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 MARCH7Q9H992 704 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
SNCA-201ENST00000336904 TMCC3Q9ULS5 477 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 ASB4Q9Y574 426 aa8.34□□□□□ -1.07
SNCA-201ENST00000336904 LINC00854A0A1B0GVQ3 168 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 SOBPA7XYQ1 873 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms