RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 OR8K3Q8NH51 312 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 HMGB4Q8WW32 186 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ALG14Q96F25 216 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 IFT27Q9BW83 186 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SERHL2Q9H4I8 314 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 NBASA2RRP1 2371 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 OR6C70A6NIJ9 312 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 PGRMC2O15173 223 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 MAGEB4O15481 346 aaPredicted RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 MSL3P1P0C860 447 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ADORA3P0DMS8 318 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SDC2P34741 201 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 AHRP35869 848 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ATP12AP54707 1039 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 CDH11P55287 796 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SLC35A2P78381 396 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 MICAQ29983 383 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 BCL7AQ4VC05 210 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 FAM26DQ5JW98 314 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ZNF362Q5T0B9 420 aaPredicted RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 LAIR1Q6GTX8 287 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 NIPAL1Q6NVV3 410 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SYCE2Q6PIF2 218 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SLCO4C1Q6ZQN7 724 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 PRSS48Q7RTY5 328 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 NRARPQ7Z6K4 114 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SERPINA11Q86U17 422 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ADIPOR2Q86V24 386 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 VRK2Q86Y07 508 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 LAX1Q8IWV1 398 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 OVCA2Q8WZ82 227 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SMPDL3AQ92484 453 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 RGMAQ96B86 450 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 ZG16BQ96DA0 208 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 QRFPRQ96P65 431 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 TEFMQ96QE5 360 aaKnown RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 SECISBP2Q96T21 854 aaKnown RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 SLC30A2Q9BRI3 323 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 SPRTNQ9H040 489 aaPredicted RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 SRMSQ9H3Y6 488 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 USP36Q9P275 1121 aaKnown RBP7.81□□□□□ -1.16
HPS4-201ENST00000336873 ZNF221Q9UK13 617 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 CDH7Q9ULB5 785 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 OR51B4Q9Y5P0 310 aa7.81□□□□□ -1.16
HPS4-201ENST00000336873 A0A1B0GVT2 93 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 A0A1W2PQU0 124 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ZC3H12DA2A288 527 aaKnown RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 J3QLW9 94 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 KLK8O60259 260 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ADAM23O75077 832 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 NFATC1O95644 943 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ZNF19P17023 458 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 FUT1P19526 365 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 PRKACBP22694 351 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 CD40LGP29965 261 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 IL12RB1P42701 662 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 RGS6P49758 472 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 INSL4Q14641 139 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 CEP78Q5JTW2 689 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 WDR45BQ5MNZ6 344 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 PIP5KL1Q5T9C9 394 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ZDHHC20Q5W0Z9 365 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 PPP2R2DQ66LE6 453 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 GRHL2Q6ISB3 625 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 OOSP2Q86WS3 158 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 KLBQ86Z14 1044 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 KLHDC8AQ8IYD2 350 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 CDK20Q8IZL9 346 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 PARP16Q8N5Y8 322 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 FAM98AQ8NCA5 519 aaKnown RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 FAM46DQ8NEK8 389 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 MUL1Q969V5 352 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ARRDC3Q96B67 414 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ZNF689Q96CS4 500 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 ECHDC3Q96DC8 303 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 TREX2Q9BQ50 279 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 TRIM45Q9H8W5 580 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 RPRD1BQ9NQG5 326 aaKnown RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 HS3ST2Q9Y278 367 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 SPEF1Q9Y4P9 236 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 GPR179Q6PRD1 2367 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 RIF1Q5UIP0 2472 aaKnown RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 WDR90Q96KV7 1748 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 A0A075B6Q4 140 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 A0A1W2PQL4 384 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 CACNB4O00305 520 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 HAT1O14929 419 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 CAPN5O15484 640 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 NOS1APO75052 506 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 HPRP00739 348 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 CYP17A1P05093 508 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 NAA10P41227 235 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 ERV3-1Q14264 604 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 LRRC26Q2I0M4 334 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 GXYLT1Q4G148 440 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 PAMR1Q6UXH9 720 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 Q6ZNX1 250 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 RAB43Q86YS6 212 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 OR52N2Q8NGI0 321 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 PATE1Q8WXA2 126 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms