RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TAS2R40P59535 323 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 TMEM86AQ8N2M4 240 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 NRG4Q8WWG1 115 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF75AQ96N20 296 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 TBL1XR1Q9BZK7 514 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 AGO1Q9UL18 857 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 MEGF6O75095 1541 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 A0A1W2PS29 197 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 UBFD1O14562 309 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 PHYHO14832 338 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 SNCAP37840 140 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 SOX9P48436 509 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 HCCSP53701 268 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 POU6F2P78424 691 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 DHRS4L2Q6PKH6 230 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 RNF130Q86XS8 419 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 IRF2BP1Q8IU81 584 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 OR8J1Q8NGP2 316 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 SERINC1Q9NRX5 453 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 KIAA0355O15063 1070 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ONECUT3O60422 494 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ESR1P03372 595 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 RPIAP49247 311 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 TUSC3Q13454 348 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 NT5C3BQ969T7 300 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 IPPKQ9H8X2 491 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 AGO4Q9HCK5 861 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 P2RX2Q9UBL9 471 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 CLIC1O00299 241 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 PMM2O15305 246 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 JRKO75564 520 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 MPIP34949 423 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 MAP2K4P45985 399 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 GIPRP48546 466 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 RAB13P51153 203 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CRISP3P54108 245 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CSNK2A1P68400 391 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 GTF2BQ00403 316 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 TBCEQ15813 527 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC43A2Q8N370 569 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CSNK2A3Q8NEV1 391 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CD180Q99467 661 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 PRRT1Q99946 306 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 MRPL15Q9P015 296 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 RNF13O43567 381 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 VIPP01282 170 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ART1P52961 327 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 DUOXA1Q1HG43 343 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 DCLRE1AQ6PJP8 1040 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF546Q86UE3 836 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 OR5M3Q8NGP4 307 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 RSPRY1Q96DX4 576 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 PWWP2AQ96N64 755 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ULBP1Q9BZM6 244 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 KCNQ5Q9NR82 932 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 AK6Q9Y3D8 172 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ACTL7AQ9Y615 435 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 TRAPPC6AO75865 159 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 C8GP07360 202 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CD3GP09693 182 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 S100A11P31949 105 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 TAS2R20P59543 309 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 RAB1AP62820 205 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 C19orf35Q6ZS72 473 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CADM3Q8N126 398 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC30A7Q8NEW0 376 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 OR6S1Q8NH40 331 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CNIH3Q8TBE1 160 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 DNAJC19Q96DA6 116 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 HSH2DQ96JZ2 352 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 PKP4Q99569 1192 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC35A5Q9BS91 424 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ARHGAP23Q9P227 1491 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 BLOC1S5-TXNDC5H3BN57 136 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ARAFP10398 606 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CETPP11597 493 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 TGM4P49221 684 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 MEOX2P50222 304 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 PLGLB1Q02325 96 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 SCARF1Q14162 830 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 UBXN2BQ14CS0 331 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 OR13F1Q8NGS4 319 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 THAP7Q9BT49 309 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF286AQ9HBT8 521 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 TXNL4BQ9NX01 149 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 CNOT2Q9NZN8 540 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 MED16Q9Y2X0 877 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 BET1O15155 118 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 SNNO75324 88 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 RAF1P04049 648 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 GLUD2P49448 558 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 GALNT13Q8IUC8 556 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 OR10K1Q8NGX5 313 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 P2RY11Q96G91 374 aa9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 TRMT61BQ9BVS5 477 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-201ENST00000333896 ACTRT3Q9BYD9 372 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms