RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 NCF4Q15080 339 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 GLYATQ6IB77 296 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 MICU2Q8IYU8 434 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 PQLC1Q8N2U9 271 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 ACOT4Q8N9L9 421 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 FAM156AQ8NDB6 213 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 ZFP28Q8NHY6 868 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 ADAMTS17Q8TE56 1095 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 MIEF2Q96C03 454 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 SMIM10Q96HG1 83 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 NSMCE2Q96MF7 247 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 SERINC2Q96SA4 455 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 C17orf62Q9BQA9 187 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 MESP1Q9BRJ9 268 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 INPP5KQ9BT40 448 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 NDOR1Q9UHB4 597 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 H3BNX3 289 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 MASP2O00187 686 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 PDPK1O15530 556 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 CPSF4O95639 269 aaKnown RBP15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 ITGB2P05107 769 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 HBQ1P09105 142 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 RAB40ALP0C0E4 278 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 POLE2P56282 527 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 MRPS22P82650 360 aaKnown RBP15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 VEZF1Q14119 521 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 GRM7Q14831 915 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 TCTE1Q5JU00 501 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 CPZQ66K79 652 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 MRPL14Q6P1L8 145 aaKnown RBP15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 ANKRD46Q86W74 232 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 IFNEQ86WN2 208 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 TICAM1Q8IUC6 712 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 SLC30A8Q8IWU4 369 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 EID3Q8N140 333 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 CSNK1A1LQ8N752 337 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 PAPD5Q8NDF8 572 aaKnown RBP15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 OR4A15Q8NGL6 344 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 OR10A6Q8NH74 314 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 NPLQ9BXD5 320 aaPredicted RBP15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 UGT2B28Q9BY64 529 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 TPT1P8Q9HAU6 139 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 LYRM4Q9HD34 91 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 THUMPD1Q9NXG2 353 aaKnown RBP15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 SRPK3Q9UPE1 567 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 ASB4Q9Y574 426 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 SLC22A7Q9Y694 548 aa15.43■□□□□ 0.06
PDLIM1-201ENST00000329399 SCN3AQ9NY46 2000 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 A0A1B0GX78 115 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 DHRS12A0PJE2 317 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 DSCR3O14972 297 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 FOXS1O43638 330 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 GBAP04062 536 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 UMODP07911 640 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 UQCRC2P22695 453 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 TLX1P31314 330 aaPredicted RBP15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 MSX2P35548 267 aaPredicted RBP15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 GZMMP51124 257 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 RBBP4Q09028 425 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 SLAMF1Q13291 335 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 CRTC2Q53ET0 693 aaPredicted RBP15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 NDUFAF5Q5TEU4 345 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 SHISA6Q6ZSJ9 500 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 PRSS41Q7RTY9 318 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 PSMA8Q8TAA3 256 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 UTP15Q8TED0 518 aaKnown RBP15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 ZFP90Q8TF47 636 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 NUDT8Q8WV74 236 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 KLHL31Q9H511 634 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 C8orf4Q9NR00 106 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 GIMAP4Q9NUV9 329 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 OLAHQ9NV23 265 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 IFT80Q9P2H3 777 aaPredicted RBP15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 CTSFQ9UBX1 484 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 KCNMB2Q9Y691 235 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 SPACA6W5XKT8 324 aa15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 HELZ2Q9BYK8 2649 aaKnown RBP15.42■□□□□ 0.06
PDLIM1-201ENST00000329399 BLACEA4D250 179 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 K7EM74 188 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 RTCAO00442 366 aaKnown RBP15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 TMPRSS11DO60235 418 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 DNAJB5O75953 348 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 ONECUT2O95948 504 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 AGXTP21549 392 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 NTSP30990 170 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 BUD31P41223 144 aaPredicted RBP15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 CDKN2CP42773 168 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 ARSFP54793 590 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 EMP3P54852 163 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 PLIN5Q00G26 463 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 CHAF1BQ13112 559 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 ELOAQ14241 798 aaKnown RBP15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 CMPK2Q5EBM0 449 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 BORAQ6PGQ7 559 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 BHLHB9Q6PI77 547 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 AMER2Q8N7J2 671 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 KCT2Q8NC54 265 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 ADCY4Q8NFM4 1077 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 MOAP1Q96BY2 351 aa15.41■□□□□ 0.06
PDLIM1-201ENST00000329399 DPH2Q9BQC3 489 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms