RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 SNAP47Q5SQN1 464 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 LINC00299Q6ZSB3 139 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 CCDC116Q8IYX3 515 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 C12orf76Q8N812 135 aaPredicted RBP12.4□□□□□ -0.42
CLGN-201ENST00000325617 OR4K5Q8NGD3 323 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 OR52I1Q8NGK6 324 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 TP53INP1Q96A56 240 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 PDXPQ96GD0 296 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 ST6GAL2Q96JF0 529 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 CAPNS2Q96L46 248 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 EFCAB11Q9BUY7 163 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 SGPP1Q9BX95 441 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 TBC1D17Q9HA65 648 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
CLGN-201ENST00000325617 TMEM39AQ9NV64 488 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 TXNL4BQ9NX01 149 aaKnown RBP12.4□□□□□ -0.42
CLGN-201ENST00000325617 GPR55Q9Y2T6 319 aaPredicted RBP12.4□□□□□ -0.42
CLGN-201ENST00000325617 A0A0B4J293 547 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 ZC3H12DA2A288 527 aaKnown RBP12.4□□□□□ -0.42
CLGN-201ENST00000325617 PGRMC2O15173 223 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 PDPK1O15530 556 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 EPPINO95925 133 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 CXCL10P02778 98 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 PCCBP05166 539 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 FUT1P19526 365 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 CSTF2P33240 577 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLGN-201ENST00000325617 HNRNPFP52597 415 aaKnown RBP12.4□□□□□ -0.42
CLGN-201ENST00000325617 C21orf58P58505 322 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 OLR1P78380 273 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 LARS2Q15031 903 aaKnown RBP12.4□□□□□ -0.42
CLGN-201ENST00000325617 P2RY14Q15391 338 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 PYDC2Q56P42 97 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 UBQLNLQ8IYU4 475 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 OR4F15Q8NGB8 312 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 TFGQ92734 400 aaPredicted RBP12.4□□□□□ -0.42
CLGN-201ENST00000325617 RNF31Q96EP0 1072 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 MOSPD1Q9UJG1 213 aa12.4□□□□□ -0.42
CLGN-201ENST00000325617 MEIOCA2RUB1 952 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 CPSF4LA6NMK7 179 aaKnown RBP12.4□□□□□ -0.43
CLGN-201ENST00000325617 LILRB3O75022 631 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 SLC2A10O95528 541 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 EPCAMP16422 314 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 SNRPD2P62316 118 aaKnown RBP12.4□□□□□ -0.43
CLGN-201ENST00000325617 RBBP4Q09028 425 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 EIF4HQ15056 248 aaKnown RBP12.4□□□□□ -0.43
CLGN-201ENST00000325617 ZDHHC20Q5W0Z9 365 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 FAAH2Q6GMR7 532 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 DPPA4Q7L190 304 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 SLC30A8Q8IWU4 369 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 ZNF689Q96CS4 500 aaPredicted RBP12.4□□□□□ -0.43
CLGN-201ENST00000325617 DTD2Q96FN9 168 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 TBX5Q99593 518 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 TMEM246Q9BRR3 403 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 TMED9Q9BVK6 235 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 C6orf106Q9H6K1 298 aaPredicted RBP12.4□□□□□ -0.43
CLGN-201ENST00000325617 DYRK4Q9NR20 520 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 ZCCHC3Q9NUD5 404 aaKnown RBP12.4□□□□□ -0.43
CLGN-201ENST00000325617 A4GNTQ9UNA3 340 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 OR1A2Q9Y585 309 aa12.4□□□□□ -0.43
CLGN-201ENST00000325617 PLXNA2O75051 1894 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 FAM183AA6NL82 134 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 C4orf51C9J302 202 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 FAM47E-STBD1D6RA91 191 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 HOXC11O43248 304 aaPredicted RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 MRPS14O60783 128 aaKnown RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 IFNA14P01570 189 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 HOXB6P17509 224 aaKnown RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 BSGP35613 385 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 RORCP51449 518 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 SYT14P1Q58G82 188 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 KIAA1161Q6NSJ0 714 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 TUBA3EQ6PEY2 450 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 METTL3Q86U44 580 aaKnown RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 PDZD3Q86UT5 571 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 KIF18BQ86Y91 864 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 SIX5Q8N196 739 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 ATP6V1C2Q8NEY4 427 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 OR52P1PQ8NH57 321 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 NACC2Q96BF6 587 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 REPS1Q96D71 796 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 NUS1Q96E22 293 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 TEFMQ96QE5 360 aaKnown RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 GFM1Q96RP9 751 aaKnown RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 NELL2Q99435 816 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 SYNPO2LQ9H987 977 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 FBXW2Q9UKT8 454 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 MKLN1Q9UL63 735 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 TP53BP1Q12888 1972 aaPredicted RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 FABP12A6NFH5 140 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 SOX9P48436 509 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 PXNP49023 591 aaPredicted RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 RAB8AP61006 207 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 PSPHP78330 225 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 RUNX1T1Q06455 604 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 ZNF791Q3KP31 576 aaPredicted RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 ZFP69Q49AA0 526 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 FNDC3BQ53EP0 1204 aaKnown RBP12.39□□□□□ -0.43
CLGN-201ENST00000325617 SLC30A6Q6NXT4 461 aa12.39□□□□□ -0.43
CLGN-201ENST00000325617 UNC5DQ6UXZ4 953 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms