RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PTERQ96BW5 349 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 TGM7Q96PF1 710 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 POT1Q9NUX5 634 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 STMND1H3BQB6 276 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 AMY2AP04746 511 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 PRKCGP05129 697 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 ERVK-25P63136 954 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC15A4Q8N697 577 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 B3GALT1Q9Y5Z6 326 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 EEF1E1-BLOC1S5C9J1V9 151 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 C11orf98E9PRG8 122 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 TYROBPO43914 113 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 SOCS5O75159 536 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 PYCR1P32322 319 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 ERN2Q76MJ5 926 aaKnown RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 ZNF559Q9BR84 538 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 J3KR12 359 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 C8orf89P0DMQ9 161 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 NAA10P41227 235 aaPredicted RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 GDF5P43026 501 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 CMTM1Q8IZ96 169 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 SACM1LQ9NTJ5 587 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 GPR83Q9NYM4 423 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 ASCC3Q8N3C0 2202 aaKnown RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 GLOD5A6NK44 160 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 KLK3P07288 261 aaPredicted RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 FGF3P11487 239 aaPredicted RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 THBS2P35442 1172 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 SNRPD2P62316 118 aaKnown RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 C6orf136Q5SQH8 315 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 TMEM173Q86WV6 379 aaPredicted RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 TEX26Q8N6G2 289 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 AKR1C2P52895 323 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 GALNT2Q10471 571 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 ZNF280BQ86YH2 543 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 OR6C4Q8NGE1 309 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 OR2T35Q8NGX2 323 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 C17orf62Q9BQA9 187 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 CFAP20Q9Y6A4 193 aaKnown RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 FUOMA2VDF0 154 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 CD79BP40259 229 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 RPS24P62847 133 aaKnown RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 SERINC3Q13530 473 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 GK3PQ14409 553 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 SSX2Q16385 188 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 SOWAHAQ2M3V2 549 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 LRIT3Q3SXY7 679 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 OR1J4Q8NGS1 313 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 HSD3B7Q9H2F3 369 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 HS3ST4Q9Y661 456 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 ZFAND4Q86XD8 727 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ALDH16A1Q8IZ83 802 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF619Q8N2I2 560 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 RNASE10Q5GAN6 216 aaKnown RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 LHPPQ9H008 270 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 SLC2A6Q9UGQ3 507 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF705FA8MVS1 300 aaPredicted RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 LYRM1O43325 122 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF705DP0CH99 300 aaPredicted RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF705BP0CI00 300 aaPredicted RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ZBTB48P10074 688 aaPredicted RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 SEMG2Q02383 582 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 PIGFQ07326 219 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 FBXL22Q6P050 247 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 FAM83HQ6ZRV2 1179 aaPredicted RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 TFGQ92734 400 aaPredicted RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 SAMD11Q96NU1 681 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 NLKQ9UBE8 527 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 TTC24A2A3L6 582 aaPredicted RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 B4GALT2O60909 372 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 SYNGR4O95473 234 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 WDPCPO95876 746 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 PCGF3Q3KNV8 242 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 PHF19Q5T6S3 580 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 MYRFLQ96LU7 910 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 SMOXQ9NWM0 555 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 KCNIP1Q9NZI2 227 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ATG4BQ9Y4P1 393 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 C8AP07357 584 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 PTNP21246 168 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 PBX2P40425 430 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 NRROSQ86YC3 692 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 RNF128Q8TEB7 428 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 C22orf15Q8WYQ4 148 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 CDC6Q99741 560 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF442Q9H7R0 627 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 SERTAD3Q9UJW9 196 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 PRAMEF2O60811 474 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 RFC2P35250 354 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 VEGFCP49767 419 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 BLOC1S3Q6QNY0 202 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 GKN2Q86XP6 184 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 TRAM1L1Q8N609 369 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 ADAMTS19Q8TE59 1207 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 KLK6Q92876 244 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 OR51B5Q9H339 312 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 CCDC163A0A0D9SF12 145 aa16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 NR0B1P51843 470 aaKnown RBP16.14■□□□□ 0.17
SMCHD1-201ENST00000320876 PTPRRQ15256 657 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms