RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ZNF655Q8N720 491 aaPredicted RBP6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 C19orf47Q8N9M1 422 aaKnown RBP6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 ATG16L2Q8NAA4 619 aa6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 TNIP2Q8NFZ5 429 aa6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 ATOH1Q92858 354 aaPredicted RBP6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 TCEAL3Q969E4 200 aa6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 GAL3ST3Q96A11 431 aa6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 NMD3Q96D46 503 aaKnown RBP6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 GIMAP5Q96F15 307 aa6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 SMIM10Q96HG1 83 aa6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 SARGQ9BW04 601 aa6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 NAA50Q9GZZ1 169 aaKnown RBP6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 CNOT11Q9UKZ1 510 aaKnown RBP6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 MRPS17Q9Y2R5 130 aaKnown RBP6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 LYVE1Q9Y5Y7 322 aa6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 RIF1Q5UIP0 2472 aaKnown RBP6.57□□□□□ -1.36
LYSMD3-201ENST00000315948 KIR2DS5A0A0G2JLQ3 304 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 A0A0G2JNG1 304 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 KIR2DS3K7RE56 304 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CYR61O00622 381 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 FOXS1O43638 330 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 PIAS2O75928 621 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MFN2O95140 757 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CLPTM1O96005 669 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ALBP02768 609 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 PROS1P07225 676 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 NR2F1P10589 423 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CPMP14384 443 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 IGFBP5P24593 272 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CAPZBP47756 277 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MVKQ03426 396 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CD47Q08722 323 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 DUSP8Q13202 625 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 VEZF1Q14119 521 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 KIR2DS5Q14953 304 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 GPAT3Q53EU6 434 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 FIGNL1Q6PIW4 674 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 BCDIN3DQ7Z5W3 292 aaKnown RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MAML2Q8IZL2 1156 aaPredicted RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 EID3Q8N140 333 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CLIP4Q8N3C7 705 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ZNF321PQ8N8H1 164 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ARL10Q8N8L6 244 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 NUP43Q8NFH3 380 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 STARD8Q92502 1023 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 SLC35A4Q96G79 324 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 SLC35G5Q96KT7 338 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 AHCTF1Q8WYP5 2266 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 H3BNH8 94 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ZBTB11O95625 1053 aaPredicted RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CD247P20963 164 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ALAS2P22557 587 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 BUD31P41223 144 aaPredicted RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 TNFRSF17Q02223 184 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MYBPC3Q14896 1274 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 NEDD8Q15843 81 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 C1orf189Q5VU69 101 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 REEP3Q6NUK4 255 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 TSPAN14Q8NG11 270 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 TTLQ8NG68 377 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 OR6T1Q8NGN1 323 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 DNAJB8Q8NHS0 232 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 APOBEC4Q8WW27 367 aaKnown RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CLDN23Q96B33 292 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MTERF3Q96E29 417 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 RMND5BQ96G75 393 aaPredicted RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 OR7D2Q96RA2 312 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 SYNDIG1Q9H7V2 258 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 DDX18Q9NVP1 670 aaKnown RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ENTPD4Q9Y227 616 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MGAQ8IWI9 3026 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 FER1L5A0AVI2 2057 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 C5orf58C9J3I9 102 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 PEX12O00623 359 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 GALR3O60755 368 aaPredicted RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 HTR1AP08908 422 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 DDX5P17844 614 aaKnown RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MYF6P23409 242 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 PCSK6P29122 969 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 NTSP30990 170 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 SSTR4P31391 388 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CLDN6P56747 220 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ELOCQ15369 112 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MAPK14Q16539 360 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 DUSP5Q16690 384 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 C10orf62Q5T681 223 aaPredicted RBP6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 TCTN3Q6NUS6 607 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 USP51Q70EK9 711 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ARHGAP22Q7Z5H3 698 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ARHGEF39Q8N4T4 335 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 GOLM1Q8NBJ4 401 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 PIGKQ92643 395 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 SLC22A18Q96BI1 424 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 GPA33Q99795 319 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 CXorf56Q9H5V9 222 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 ADPRHL2Q9NX46 363 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 IL20RAQ9UHF4 553 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 SLC22A7Q9Y694 548 aa6.56□□□□□ -1.36
LYSMD3-201ENST00000315948 MED12Q93074 2177 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms