RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ADAM29Q9UKF5 820 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 TMEM5Q9Y2B1 443 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 PLRG1O43660 514 aaKnown RBP12.95□□□□□ -0.34
DDX54-202ENST00000314045 TLX3O43711 291 aaPredicted RBP12.95□□□□□ -0.34
DDX54-202ENST00000314045 PCGF2P35227 344 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 REEP5Q00765 189 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 IL18R1Q13478 541 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 SELPLGQ14242 412 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 GBX1Q14549 363 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 XKR7Q5GH72 579 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 VWA5B2Q8N398 1253 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 OR8J2Q8NGG1 315 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 OR5D16Q8NGK9 328 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 KLHL6Q8WZ60 621 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 FCGR1BQ92637 280 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 MS4A4EQ96PG1 132 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 DAPL1A0PJW8 107 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 H0YAE9 185 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 FAAHO00519 579 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 KLK8O60259 260 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 C8BP07358 591 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 POU2F2P09086 479 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 GM2AP17900 193 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 RORAP35398 523 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 UGT8Q16880 541 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 RPS26P11Q5JNZ5 115 aaPredicted RBP12.95□□□□□ -0.34
DDX54-202ENST00000314045 NANOGNBQ7Z5D8 188 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 TEX37Q96LM6 180 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 ZBTB20Q9HC78 741 aaPredicted RBP12.95□□□□□ -0.34
DDX54-202ENST00000314045 SOCS2O14508 198 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 SCO2O43819 266 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 AHSA1O95433 338 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 PKLRP30613 574 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 CASRP41180 1078 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 TMED10P49755 219 aaKnown RBP12.95□□□□□ -0.34
DDX54-202ENST00000314045 SELENOWP63302 87 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 TXNL4AP83876 142 aaKnown RBP12.95□□□□□ -0.34
DDX54-202ENST00000314045 NADK2Q4G0N4 442 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 CCDC115Q96NT0 180 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 TBX5Q99593 518 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
DDX54-202ENST00000314045 CENPXA8MT69 81 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 PRR23D1E9PI22 279 aaPredicted RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 BLOC1S5-TXNDC5H3BN57 136 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 POLR1CO15160 346 aaPredicted RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 ARHGEF9O43307 516 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 FESP07332 822 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 PRR23D2P0DMB1 279 aaPredicted RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 TLR1Q15399 786 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 SLC35F1Q5T1Q4 408 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 MFSD2AQ8NA29 543 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 PATE1Q8WXA2 126 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 S100A13Q99584 98 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 TRIM2Q9C040 744 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 RACGAP1Q9H0H5 632 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 OR52A5Q9H2C5 316 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 ACSS1Q9NUB1 689 aaPredicted RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 ALKBH4Q9NXW9 302 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 GMPR2Q9P2T1 348 aaKnown RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 GPR75O95800 540 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 DBIP07108 87 aaKnown RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 C7P10643 843 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 TUBB3Q13509 450 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 FRRS1Q6ZNA5 592 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 CCL4L1Q8NHW4 92 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 TEX10Q9NXF1 929 aaPredicted RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 AIFM1O95831 613 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 RENP00797 406 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 CEACAM5P06731 702 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 ZNF3P17036 446 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 LCN1P1Q5VSP4 162 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 RSBN1Q5VWQ0 802 aaPredicted RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 IL22RA1Q8N6P7 574 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 OR51A7Q8NH64 312 aa12.94□□□□□ -0.34
DDX54-202ENST00000314045 C9orf43Q8TAL5 461 aaPredicted RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 CAB39Q9Y376 341 aaPredicted RBP12.94□□□□□ -0.34
DDX54-202ENST00000314045 EFCAB9A8MZ26 197 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 ZNF195O14628 629 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 CPNE3O75131 537 aaKnown RBP12.93□□□□□ -0.34
DDX54-202ENST00000314045 HPRP00739 348 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 ZNF823P16415 610 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 GABRG2P18507 467 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 DCTP40126 519 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 TIGD6Q17RP2 521 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.93□□□□□ -0.346e-10■■□□□ 13.6
DDX54-202ENST00000314045 OSTF1Q92882 214 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 LRRC3BQ96PB8 259 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 SLC29A1Q99808 456 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 KIF13BQ9NQT8 1826 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 TCRBV3S1A0A5B6 114 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 PRAMEF2O60811 474 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 CDH11P55287 796 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 NPRL3Q12980 569 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 EID2Q8N6I1 236 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 MAP3K3Q99759 626 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 GORASP2Q9H8Y8 452 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 SRPK3Q9UPE1 567 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms