RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CCM2Q9BSQ5 444 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC12A9Q9BXP2 914 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 RACGAP1Q9H0H5 632 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PPA2Q9H2U2 334 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PRO3102Q9H379 93 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 ERVMER34-1Q9H9K5 563 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PLSCR3Q9NRY6 295 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TMEM184CQ9NVA4 438 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 MAT2BQ9NZL9 334 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 ENOPH1Q9UHY7 261 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 FZD4Q9ULV1 537 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 COLQQ9Y215 455 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC22A14Q9Y267 594 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 A0A1W2PQF6 199 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 C1orf226A1L170 272 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 C8GP07360 202 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 HIST1H2AGP0C0S8 130 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PIPP12273 146 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 HIST1H2ADP20671 130 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 CHMP24386 653 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 CRISP3P54108 245 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TFF2Q03403 129 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 SCRN3Q0VDG4 424 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 RIN1Q13671 783 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PTCHD3Q3KNS1 767 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 Q5BKY6 102 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 GARNL3Q5VVW2 1013 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 NXNL2Q5VZ03 156 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 SDE2Q6IQ49 451 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 OR8H2Q8N162 312 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 B3GNT7Q8NFL0 401 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 HIST1H2AHQ96KK5 128 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 HIST1H2AJQ99878 128 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TTYH2Q9BSA4 534 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 H2AFJQ9BTM1 129 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 THSD1Q9NS62 852 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 C14orf119Q9NWQ9 140 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 ERVK13-1Q9NX77 482 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 MS4A12Q9NXJ0 267 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 DUSP12Q9UNI6 340 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZFR2Q9UPR6 939 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 CFAP20Q9Y6A4 193 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PCM1Q15154 2024 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3DA0A087WVF3 549 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3IA0A087WXS9 549 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3EA0A087X179 549 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3KA0A087X1G2 549 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3FA6NER0 549 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3LB9A6J9 549 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC31A1O15431 190 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 GCM2O75603 506 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 POP7O75817 140 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 WDPCPO95876 746 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3HP0C7X1 549 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 JUPP14923 745 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TNFRSF4P43489 277 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 RFX2P48378 723 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 IDH2P48735 452 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PRLHRP49683 370 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 ENPP2Q13822 863 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 RGNQ15493 299 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TSTQ16762 297 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PLEKHS1Q5SXH7 462 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3GQ6DHY5 549 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3CQ6IPX1 549 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZNF782Q6ZMW2 699 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 Q7L0L9 218 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TRMT11Q7Z4G4 463 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 CAMKMTQ7Z624 323 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D3Q8IZP1 549 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 CLECL1Q8IZS7 167 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 C2orf73Q8N5S3 287 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 C11orf65Q8NCR3 313 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 DNAJA4Q8WW22 397 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 PDXPQ96GD0 296 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 NECTIN4Q96NY8 510 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 MAPKAP1Q9BPZ7 522 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 DUSP26Q9BV47 211 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 IMPAD1Q9NX62 359 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC23A2Q9UGH3 650 aa9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 NDRG2Q9UN36 371 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 RUVBL1Q9Y265 456 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 KLF2Q9Y5W3 355 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-201ENST00000308521 ARHGEF33A8MVX0 844 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 YY2O15391 372 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 GPX5O75715 221 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLCO2B1O94956 709 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 AP2A2O94973 939 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 C1QBP02746 253 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 HSMCR30P0CW71 290 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 C5AR1P21730 350 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 HLA-DMAP28067 261 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 UQCRC1P31930 480 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 CDC42P60953 191 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 LRRC74AQ0VAA2 488 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 IFI44LQ53G44 452 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZBTB37Q5TC79 503 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ANXA8L1Q5VT79 327 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ARSKQ6UWY0 536 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms