RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 MAGED4Q96JG8 741 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 OR8D2Q9GZM6 311 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 PCDHGB4Q9UN71 923 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 BBIP1A8MTZ0 92 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 MASP2O00187 686 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 S1PR1P21453 382 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 PTPN6P29350 595 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 SSTR4P31391 388 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 CPA2P48052 419 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 EXOSC7Q15024 291 aaKnown RBP25.29■■□□□ 1.64
HDAC3-201ENST00000305264 MMEL1Q495T6 779 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 GTDC1Q4AE62 458 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 C6orf163Q5TEZ5 329 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 NFAM1Q8NET5 270 aaPredicted RBP25.29■■□□□ 1.64
HDAC3-201ENST00000305264 OR5AK3PQ8NH89 298 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 GOT1L1Q8NHS2 421 aaPredicted RBP25.29■■□□□ 1.64
HDAC3-201ENST00000305264 FBXL20Q96IG2 436 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 PAIP1Q9H074 479 aaKnown RBP25.29■■□□□ 1.64
HDAC3-201ENST00000305264 MAP10Q9P2G4 905 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 RAXQ9Y2V3 346 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 ANKRD11Q6UB99 2663 aaPredicted RBP25.29■■□□□ 1.64
HDAC3-201ENST00000305264 CDC14CA4D256 554 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 MRASO14807 208 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 PRKAR1AP10644 381 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 SOAT1P35610 550 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 STX5Q13190 355 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 FHL5Q5TD97 284 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 SENP5Q96HI0 755 aaPredicted RBP25.29■■□□□ 1.64
HDAC3-201ENST00000305264 TAGLN3Q9UI15 199 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 ZNF639Q9UID6 485 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 SSUH2Q9Y2M2 353 aa25.29■■□□□ 1.64
HDAC3-201ENST00000305264 CCT8L1PA6NM43 557 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 PLOD2O00469 737 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 CBX7O95931 251 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 CLPSP04118 112 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 DUSP8Q13202 625 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 COQ5Q5HYK3 327 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 NDUFAF7Q7L592 441 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 DPP10Q8N608 796 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 ZNF721Q8TF20 911 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 FAM120BQ96EK7 910 aaKnown RBP25.28■■□□□ 1.64
HDAC3-201ENST00000305264 ZNF160Q9HCG1 818 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 LOC400499M0QZD8 3231 aa25.28■■□□□ 1.64
HDAC3-201ENST00000305264 UPK1AO00322 258 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 DYRK3O43781 588 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 PLOD3O60568 738 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 UBOX5O94941 541 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 SLITRK5O94991 958 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 C1QCP02747 245 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 IGKV3-11P04433 115 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 HOXB9P17482 250 aaPredicted RBP25.27■■□□□ 1.64
HDAC3-201ENST00000305264 SLC26A5P58743 744 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 FUT7Q11130 342 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 OR2L13Q8N349 312 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 B3GNT7Q8NFL0 401 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 IMMP1LQ96LU5 166 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 IL1RL2Q9HB29 575 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 DDX18Q9NVP1 670 aaKnown RBP25.27■■□□□ 1.64
HDAC3-201ENST00000305264 A0A096LPI6 279 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 NSG1A0A0A6YYJ2 146 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 NME6O75414 186 aaPredicted RBP25.27■■□□□ 1.64
HDAC3-201ENST00000305264 TRPC1P48995 793 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 GPR143P51810 404 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 GABPB1Q06547 395 aaPredicted RBP25.27■■□□□ 1.64
HDAC3-201ENST00000305264 C6orf89Q6UWU4 347 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 DLEU7Q6UYE1 221 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 ZNF621Q6ZSS3 439 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 SZRD1Q7Z422 152 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 DHDDSQ86SQ9 333 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 MSRB3Q8IXL7 192 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 MORN4Q8NDC4 146 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 NCLNQ969V3 563 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 TUBB6Q9BUF5 446 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 PTGFRNQ9P2B2 879 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 VPS4AQ9UN37 437 aa25.27■■□□□ 1.64
HDAC3-201ENST00000305264 PPIEQ9UNP9 301 aaKnown RBP25.27■■□□□ 1.64
HDAC3-201ENST00000305264 A0A087WV62 115 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 ZNF891A8MT65 544 aaPredicted RBP25.26■■□□□ 1.63
HDAC3-201ENST00000305264 AIM2O14862 343 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 KCNH1O95259 989 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 ANP32DO95626 131 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 NFYCQ13952 458 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 SPDYE7PQ495Y7 208 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 LRIF1Q5T3J3 769 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 APCDD1LQ8NCL9 501 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 NUDT9Q9BW91 350 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 SLC25A37Q9NYZ2 338 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 PCDHB14Q9Y5E9 798 aa25.26■■□□□ 1.63
HDAC3-201ENST00000305264 RNF103-CHMP3A0A140T963 221 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 PEX12O00623 359 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 RRP8O43159 456 aaKnown RBP25.25■■□□□ 1.63
HDAC3-201ENST00000305264 CELA2AP08217 269 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 CCT3P49368 545 aaKnown RBP25.25■■□□□ 1.63
HDAC3-201ENST00000305264 TMEM64Q6YI46 380 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 OR52R1Q8NGF1 315 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 OR1N1Q8NGS0 311 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 ZCCHC14Q8WYQ9 949 aaKnown RBP25.25■■□□□ 1.63
HDAC3-201ENST00000305264 AURKBQ96GD4 344 aaPredicted RBP25.25■■□□□ 1.63
HDAC3-201ENST00000305264 ZCCHC3Q9NUD5 404 aaKnown RBP25.25■■□□□ 1.63
HDAC3-201ENST00000305264 VAPAQ9P0L0 249 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms