RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 BTN3A3O00478 584 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 CCT3P49368 545 aaKnown RBP20.73■□□□□ 0.91
TPM4-201ENST00000300933 PCBP4P57723 403 aaKnown RBP20.73■□□□□ 0.91
TPM4-201ENST00000300933 DUSP2Q05923 314 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 HTR4Q13639 388 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 PUM1Q14671 1186 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■□□□ 13.8
TPM4-201ENST00000300933 OR10G2Q8NGC3 310 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 RPLP0P6Q8NHW5 317 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 VANGL1Q8TAA9 524 aaPredicted RBP20.73■□□□□ 0.91
TPM4-201ENST00000300933 TBC1D20Q96BZ9 403 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 APOL4Q9BPW4 351 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 KCNK12Q9HB15 430 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 NDRG4Q9ULP0 352 aaKnown RBP20.73■□□□□ 0.91
TPM4-201ENST00000300933 SAGE2PA6NJ88 616 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 A8MV72 311 aaPredicted RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 C5orf58C9J3I9 102 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 RASGRP1O95267 797 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 OR12D1P0DN82 309 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 ACADMP11310 421 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 CERS1P27544 350 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 C21orf33P30042 268 aaPredicted RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 FEN1P39748 380 aaKnown RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 RACK1P63244 317 aaKnown RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 MAD2L1BPQ15013 274 aaPredicted RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 GPR19Q15760 415 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 SYPL1Q16563 259 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 ZNF630Q2M218 657 aaPredicted RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 ZNF542PQ5EBM4 170 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 CCDC116Q8IYX3 515 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 LGI4Q8N135 537 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 KCT2Q8NC54 265 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 LCN9Q8WX39 176 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 PATE1Q8WXA2 126 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 OR5P2Q8WZ92 322 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 DHRS1Q96LJ7 313 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 EPYCQ99645 322 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 GLIPR2Q9H4G4 154 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 TRPC4Q9UBN4 977 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 GPR89AB7ZAQ6 455 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 GPR89BP0CG08 455 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 ACTR1BP42025 376 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 PCBP3P57721 371 aaKnown RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 ACTR1AP61163 376 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 REEP3Q6NUK4 255 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 POP5Q969H6 163 aaKnown RBP20.72■□□□□ 0.91
TPM4-201ENST00000300933 BMFQ96LC9 184 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 ITPAQ9BY32 194 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 ANGPT4Q9Y264 503 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 N6AMT1Q9Y5N5 214 aa20.72■□□□□ 0.91
TPM4-201ENST00000300933 A0A1W2PR48 441 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 PRAMEF27A3QJZ7 478 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 CLDN24A6NM45 220 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 RGS13O14921 159 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 PTTG1O95997 202 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 NDUFV2P19404 249 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 S100A5P33763 92 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 IDH2P48735 452 aaKnown RBP20.71■□□□□ 0.91
TPM4-201ENST00000300933 MVKQ03426 396 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 RBBP4Q09028 425 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 RAB30Q15771 203 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 SLC38A4Q969I6 547 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 TP53INP1Q96A56 240 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 MS4A6EQ96DS6 147 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 NEURL3Q96EH8 262 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 RIPOR3Q96MK2 946 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 OR2M4Q96R27 311 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 DDX31Q9H8H2 851 aaKnown RBP20.71■□□□□ 0.91
TPM4-201ENST00000300933 ZNF624Q9P2J8 865 aaPredicted RBP20.71■□□□□ 0.91
TPM4-201ENST00000300933 BOLA1Q9Y3E2 137 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 A0A0A6YYD5 115 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 TAF4O00268 1085 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 HMGN4O00479 90 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 NCBP2P52298 156 aaKnown RBP eCLIP20.71■□□□□ 0.91
TPM4-201ENST00000300933 CRB2Q5IJ48 1285 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 TOR1AIP1Q5JTV8 583 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 SAXO2Q658L1 398 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 ACOT4Q8N9L9 421 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 DOK4Q8TEW6 326 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 C1QTNF7Q9BXJ2 289 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 C14orf119Q9NWQ9 140 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 RNF6Q9Y252 685 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 TDRD6O60522 2096 aaKnown RBP20.71■□□□□ 0.91
TPM4-201ENST00000300933 LIM2P55344 173 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 WDR53Q7Z5U6 358 aaPredicted RBP20.71■□□□□ 0.91
TPM4-201ENST00000300933 ENTHD1Q8IYW4 607 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 UTP15Q8TED0 518 aaKnown RBP20.71■□□□□ 0.91
TPM4-201ENST00000300933 ACER3Q9NUN7 267 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 APOBEC3BQ9UH17 382 aaKnown RBP20.71■□□□□ 0.91
TPM4-201ENST00000300933 ZNF221Q9UK13 617 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 UGT2A1Q9Y4X1 527 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 PCDHGA6Q9Y5G7 932 aa20.71■□□□□ 0.91
TPM4-201ENST00000300933 PRR19A6NJB7 356 aa20.7■□□□□ 0.9
TPM4-201ENST00000300933 NOTOA8MTQ0 251 aa20.7■□□□□ 0.9
TPM4-201ENST00000300933 DSCR3O14972 297 aa20.7■□□□□ 0.9
TPM4-201ENST00000300933 PRICKLE3O43900 615 aaPredicted RBP20.7■□□□□ 0.9
TPM4-201ENST00000300933 TPST2O60704 377 aa20.7■□□□□ 0.9
TPM4-201ENST00000300933 SEMA7AO75326 666 aa20.7■□□□□ 0.9
TPM4-201ENST00000300933 WBP4O75554 376 aaKnown RBP20.7■□□□□ 0.9
TPM4-201ENST00000300933 CLEC3AO75596 197 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms