RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ZC3H14Q6PJT7 736 aaKnown RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 SLC39A5Q6ZMH5 540 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 ENDOVQ8N8Q3 282 aaKnown RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 C7orf34Q96L11 122 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 OR2S2Q9NQN1 319 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 SMOXQ9NWM0 555 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 GPRC5BQ9NZH0 403 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 OR52A4PA6NMU1 304 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 H0YAE9 185 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 STT3AP46977 705 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 POU3F4P49335 361 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 RGS19P49795 217 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 RPS15AP62244 130 aaKnown RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 SRYQ05066 204 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 SPATS1Q496A3 300 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 CLLU1OSQ5K130 101 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 EIF5AL1Q6IS14 154 aaKnown RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 DUS1LQ6P1R4 473 aaKnown RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 FIGLAQ6QHK4 219 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 ZNF367Q7RTV3 350 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 LAS2Q8IYD9 372 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 TESCQ96BS2 214 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 LGALS12Q96DT0 336 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 SGTBQ96EQ0 304 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 STRADBQ9C0K7 418 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 OR10A4Q9H209 315 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 TMEM9Q9P0T7 183 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 IGKV6-21A0A0C4DH24 114 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 A0A0G2JPF8 293 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 HNRNPCL3B7ZW38 293 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 RBBP9O75884 186 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 CPNE6O95741 557 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 HNRNPCL4P0DMR1 293 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 S100A2P29034 98 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 FAM189A2Q15884 450 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 CHRFAM7AQ494W8 412 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 Q8N402 240 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 TEX26Q8N6G2 289 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 OR6Q1Q8NGQ2 317 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 COQ8AQ8NI60 647 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 C16orf78Q8WTQ4 265 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 PGAM5Q96HS1 289 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 MTMR10Q9NXD2 777 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 NPIPB15A6NHN6 443 aaPredicted RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 HSD3B1P14060 373 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 RHCEP18577 417 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 HSD3B2P26439 372 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 RBMXP38159 391 aaKnown RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 LBX1P52954 281 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 TAS2R38P59533 333 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 RUNDC3AQ59EK9 446 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 NDUFAF5Q5TEU4 345 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 LETMD1Q6P1Q0 360 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 PLBD1Q6P4A8 553 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 MINDY1Q8N5J2 469 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 DIO2Q92813 273 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 PTERQ96BW5 349 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 CPNE2Q96FN4 548 aaPredicted RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 MYEF2Q9P2K5 600 aaKnown RBP10.93□□□□□ -0.66
USP53-201ENST00000274030 WASF3Q9UPY6 502 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 LTBP3Q9NS15 1303 aa10.93□□□□□ -0.66
USP53-201ENST00000274030 ZCWPW2A0A1B0GU75 182 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 THEGLP0DJG4 465 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 HOXD8P13378 290 aaPredicted RBP10.92□□□□□ -0.66
USP53-201ENST00000274030 NDUFV2P19404 249 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 ZNF84P51523 738 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 MAP4K2Q12851 820 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 CDNFQ49AH0 187 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 CCDC58Q4VC31 144 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 OR52E8Q6IFG1 317 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 MEX3DQ86XN8 651 aaKnown RBP10.92□□□□□ -0.66
USP53-201ENST00000274030 ZNF584Q8IVC4 421 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 OR4C15Q8NGM1 316 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 OR8J1Q8NGP2 316 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 CD300LFQ8TDQ1 290 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 FRS2Q8WU20 508 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 CIDECQ96AQ7 238 aaPredicted RBP10.92□□□□□ -0.66
USP53-201ENST00000274030 SCRN2Q96FV2 425 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 PITX2Q99697 317 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 MMP27Q9H306 513 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 ENY2Q9NPA8 101 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 MYH11P35749 1972 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 OR5K4A6NMS3 321 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 GPR39O43194 453 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 CA3P07451 260 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 IVDP26440 423 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 OTX2P32243 289 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 PTGS2P35354 604 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 GGT2P36268 569 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 FOXA1P55317 472 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 SLC26A5P58743 744 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 CLCA4Q14CN2 919 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 KANK2Q63ZY3 851 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 STEAP4Q687X5 459 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 TMPPEQ6ZT21 453 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 NETO1Q8TDF5 533 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 ZNF285Q96NJ3 590 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 SMIM14Q96QK8 99 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 IL26Q9NPH9 171 aa10.92□□□□□ -0.66
USP53-201ENST00000274030 BACE2Q9Y5Z0 518 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms