RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 DGKQP52824 942 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 ETF1P62495 437 aaKnown RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 SNTB1Q13884 538 aaKnown RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 TRADDQ15628 312 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 NNATQ16517 81 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 C10orf62Q5T681 223 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 LGSNQ5TDP6 509 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 RTL6Q6ICC9 239 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 MRM1Q6IN84 353 aaKnown RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 ZDHHC24Q6UX98 284 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 SPNS3Q6ZMD2 512 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 LACC1Q8IV20 430 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 LIX1LQ8IVB5 337 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 L3MBTL4Q8NA19 623 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 ADCY4Q8NFM4 1077 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 OR7G1Q8NGA0 311 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 OR1J4Q8NGS1 313 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 SELENOMQ8WWX9 145 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 GPATCH1Q9BRR8 931 aaKnown RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 MRPL1Q9BYD6 325 aaKnown RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 CLEC4MQ9H2X3 399 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 CXorf21Q9HAI6 301 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 CNOT11Q9UKZ1 510 aaKnown RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 SNX6Q9UNH7 406 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 C1orf226A1L170 272 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 LRRC3CA6NJW4 275 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 DIAPH2O60879 1101 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 OTCP00480 354 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 CPMP14384 443 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 TAC1P20366 129 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 DNAJA1P31689 397 aaKnown RBP11.23□□□□□ -0.61
TRAF4-202ENST00000262396 FEN1P39748 380 aaKnown RBP11.23□□□□□ -0.61
TRAF4-202ENST00000262396 ASCL1P50553 236 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 PLCXD2Q0VAA5 305 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 TECRLQ5HYJ1 363 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 ANGPTL8Q6UXH0 198 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 KIF18BQ86Y91 864 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 VWA5B2Q8N398 1253 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 C17orf53Q8N3J3 647 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-202ENST00000262396 ACBD4Q8NC06 268 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 OR52B6Q8NGF0 335 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 WDR20Q8TBZ3 569 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 SPPL2AQ8TCT8 520 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 ZNF592Q92610 1267 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 KLHL29Q96CT2 875 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 GNRHR2Q96P88 292 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 SECISBP2Q96T21 854 aaKnown RBP11.23□□□□□ -0.61
TRAF4-202ENST00000262396 SH2D2AQ9NP31 389 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 GIMAP4Q9NUV9 329 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 SENP1Q9P0U3 644 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 XPR1Q9UBH6 696 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 FOXD3Q9UJU5 478 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-202ENST00000262396 ADAM29Q9UKF5 820 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 SLC6A5Q9Y345 797 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 L3MBTL1Q9Y468 752 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 PCDHGB3Q9Y5G1 929 aa11.23□□□□□ -0.61
TRAF4-202ENST00000262396 TEP1Q99973 2627 aaKnown RBP11.23□□□□□ -0.61
TRAF4-202ENST00000262396 OTOGQ6ZRI0 2925 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 STX16-NPEPL1H3BU86 382 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 OR7A17O14581 309 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 STX16O14662 325 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 EPPINO95925 133 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 CYP4B1P13584 511 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 CD99P14209 185 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 CSNK2A2P19784 350 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-202ENST00000262396 ENDOUP21128 410 aaKnown RBP11.22□□□□□ -0.61
TRAF4-202ENST00000262396 FBN2P35556 2912 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 CPA2P48052 419 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 CDK9P50750 372 aaKnown RBP11.22□□□□□ -0.61
TRAF4-202ENST00000262396 ACSF3Q4G176 576 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-202ENST00000262396 BICRALQ6AI39 1079 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 LYPD8Q6UX82 237 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 CHMP1BQ7LBR1 199 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 TNIP2Q8NFZ5 429 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 OR4F6Q8NGB9 312 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 OR14L1PQ8NHC6 308 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 UHMK1Q8TAS1 419 aaKnown RBP11.22□□□□□ -0.61
TRAF4-202ENST00000262396 NRGNQ92686 78 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
TRAF4-202ENST00000262396 UCN3Q969E3 161 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 ABTB1Q969K4 478 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-202ENST00000262396 TIMP4Q99727 224 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 YIPF4Q9BSR8 244 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 LRRC1Q9BTT6 524 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 NTMT1Q9BV86 223 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 ANGPTL4Q9BY76 406 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 ZNF407Q9C0G0 2248 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 EPB41L4BQ9H329 900 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 ACSS3Q9H6R3 686 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 ZNF358Q9NW07 568 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 NINJ2Q9NZG7 142 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 CRIM1Q9NZV1 1036 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 PRODH2Q9UF12 536 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 NFU1Q9UMS0 254 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 C15orf41Q9Y2V0 281 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 POLQO75417 2590 aa11.22□□□□□ -0.61
TRAF4-202ENST00000262396 INTS1Q8N201 2190 aaKnown RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 UQCRHLA0A096LP55 91 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 TUBAL3A6NHL2 446 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms