RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OR4M2Q8NGB6 313 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 PLD4Q96BZ4 506 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 SENP5Q96HI0 755 aaPredicted RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 MS4A3Q96HJ5 214 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 SAP130Q9H0E3 1048 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 TEX10Q9NXF1 929 aaPredicted RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 ZNF282Q9UDV7 671 aaPredicted RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 KCNE2Q9Y6J6 123 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 KIAA0100Q14667 2235 aaKnown RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 CEP290O15078 2479 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 PIPSLA2A3N6 862 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 HMX3A6NHT5 357 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 CPSF4LA6NMK7 179 aaKnown RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 ZNF670-ZNF695F2Z2N8 137 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 GFYI3L273 518 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 AKAP8O43823 692 aaKnown RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 ZNF780AO75290 641 aaPredicted RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 KLHL18O94889 574 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 FAPQ12884 760 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 GPR33Q49SQ1 333 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 MARCH9Q86YJ5 346 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 SNX18Q96RF0 628 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 CCDC86Q9H6F5 360 aaKnown RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 RC3H2Q9HBD1 1191 aaKnown RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 CAPN10Q9HC96 672 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 KLHL1Q9NR64 748 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 TBX21Q9UL17 535 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 LSM2Q9Y333 95 aaKnown RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 F5P12259 2224 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 KIAA1671Q9BY89 1806 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 KPNA3O00505 521 aaPredicted RBP12.29□□□□□ -0.44
SNX1-201ENST00000261889 NUPL2O15504 423 aaKnown RBP12.29□□□□□ -0.44
SNX1-201ENST00000261889 MRPL3P09001 348 aaKnown RBP12.29□□□□□ -0.44
SNX1-201ENST00000261889 ZNF250P15622 560 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 GPR4P46093 362 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 LIMK1P53667 647 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 SYT14P1Q58G82 188 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 YIF1BQ5BJH7 314 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 TOR1AIP1Q5JTV8 583 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 TRIM40Q6P9F5 258 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 CCDC149Q6ZUS6 474 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 ZER1Q7Z7L7 766 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 LAPTM4BQ86VI4 370 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 VWA5B2Q8N398 1253 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 OR52N2Q8NGI0 321 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 CHTF18Q8WVB6 975 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 CDCA4Q9BXL8 241 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 PPIL3Q9H2H8 161 aaKnown RBP12.29□□□□□ -0.44
SNX1-201ENST00000261889 ASAH2Q9NR71 780 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 TMEM45AQ9NWC5 275 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 GULP1Q9UBP9 304 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 BTNL2Q9UIR0 455 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 PRAMEF27A3QJZ7 478 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 PRR23AA6NEV1 266 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 PDE9AO76083 593 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 EOMESO95936 686 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 CXCL10P02778 98 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 HRGP04196 525 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 OR10A3P58181 314 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 TEAD4Q15561 434 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 PGBD2Q6P3X8 592 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 SLC37A3Q8NCC5 494 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 OR4K5Q8NGD3 323 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 OR6T1Q8NGN1 323 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 KCNE3Q9Y6H6 103 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 NPPBP16860 134 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 ALAS2P22557 587 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 MAP2K3P46734 347 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 C1DQ13901 141 aaKnown RBP12.29□□□□□ -0.44
SNX1-201ENST00000261889 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 RNFT2Q96EX2 444 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 CRELD1Q96HD1 420 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 FAM46AQ96IP4 442 aaKnown RBP12.29□□□□□ -0.44
SNX1-201ENST00000261889 RAD9AQ99638 391 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 CCDC32Q9BV29 185 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 TTLL2Q9BWV7 592 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 AP3M1Q9Y2T2 418 aa12.29□□□□□ -0.44
SNX1-201ENST00000261889 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 H7BY64 318 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 POLR1CO15160 346 aaPredicted RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 FABP7O15540 132 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 H1F0P07305 194 aaKnown RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 NNMTP40261 264 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 RFX3P48380 749 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 WDR45BQ5MNZ6 344 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 KLBQ86Z14 1044 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 ADGRF3Q8IZF5 1079 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 OR5AR1Q8NGP9 310 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 SLC25A46Q96AG3 418 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 PRAP1Q96NZ9 151 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 HHIPQ96QV1 700 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 CLCA2Q9UQC9 943 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 ANGPT4Q9Y264 503 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 PCDHGB2Q9Y5G2 931 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 CELSR3Q9NYQ7 3312 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 HYKKA2RU49 373 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms