RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ZBTB11O95625 1053 aaPredicted RBP16.39■□□□□ 0.21
SRSF1-201ENST00000258962 MT-ND1P03886 318 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 CSNK2A2P19784 350 aaPredicted RBP16.39■□□□□ 0.21
SRSF1-201ENST00000258962 EEF1A2Q05639 463 aaKnown RBP16.39■□□□□ 0.21
SRSF1-201ENST00000258962 OR52E8Q6IFG1 317 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 IZUMO2Q6UXV1 221 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 GALNT10Q86SR1 603 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 KMT5CQ86Y97 462 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 CCDC116Q8IYX3 515 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 CARFQ8N187 725 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 TMEM52Q8NDY8 209 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 ADCY4Q8NFM4 1077 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 OR9A4Q8NGU2 314 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 KCNE4Q8WWG9 221 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 DDA1Q9BW61 102 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 PRDM9Q9NQV7 894 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 FBXO8Q9NRD0 319 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 AGPAT4Q9NRZ5 378 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 SEMA5BQ9P283 1151 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 FAF1Q9UNN5 650 aaPredicted RBP16.39■□□□□ 0.21
SRSF1-201ENST00000258962 PCDHGA3Q9Y5H0 932 aa16.39■□□□□ 0.21
SRSF1-201ENST00000258962 C9orf172C9J069 976 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 CYR61O00622 381 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 POLR1CO15160 346 aaPredicted RBP16.38■□□□□ 0.21
SRSF1-201ENST00000258962 RDH16O75452 317 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 PRKD3O94806 890 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 FCGR1AP12314 374 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 NELFEP18615 380 aaKnown RBP16.38■□□□□ 0.21
SRSF1-201ENST00000258962 KDELR2P33947 212 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 GPC1P35052 558 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 CCT3P49368 545 aaKnown RBP16.38■□□□□ 0.21
SRSF1-201ENST00000258962 CRYBA2P53672 197 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 RPS26P62854 115 aaKnown RBP16.38■□□□□ 0.21
SRSF1-201ENST00000258962 KCNAB1Q14722 419 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 SPDYE7PQ495Y7 208 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 SFT2D3Q587I9 215 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 CEACAM20Q6UY09 585 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 TMEM64Q6YI46 380 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 C6orf120Q7Z4R8 191 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 BMPERQ8N8U9 685 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 C11orf65Q8NCR3 313 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 RNF145Q96MT1 663 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 ZPBPQ9BS86 351 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 CHID1Q9BWS9 393 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 NPLQ9BXD5 320 aaPredicted RBP16.38■□□□□ 0.21
SRSF1-201ENST00000258962 SERHL2Q9H4I8 314 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 TMEM38AQ9H6F2 299 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 ANKHQ9HCJ1 492 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 GIMAP4Q9NUV9 329 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 WDR70Q9NW82 654 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 ZNF780BQ9Y6R6 833 aa16.38■□□□□ 0.21
SRSF1-201ENST00000258962 ANKRD11Q6UB99 2663 aaPredicted RBP16.38■□□□□ 0.21
SRSF1-201ENST00000258962 A0A087WV48 116 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 H3BMH7 237 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 FOXS1O43638 330 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 GCM2O75603 506 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-201ENST00000258962 RAP2AP10114 183 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 ARAFP10398 606 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 CD82P27701 267 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 TLX1P31314 330 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-201ENST00000258962 HSD11B2P80365 405 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 GRAMD1BQ3KR37 738 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 FAM98BQ52LJ0 330 aaKnown RBP16.37■□□□□ 0.21
SRSF1-201ENST00000258962 LRRC23Q53EV4 343 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-201ENST00000258962 TMTC4Q5T4D3 741 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 HORMAD2Q8N7B1 307 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 PPWD1Q96BP3 646 aaKnown RBP16.37■□□□□ 0.21
SRSF1-201ENST00000258962 SLC47A1Q96FL8 570 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 SLC41A2Q96JW4 573 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 UGT2B28Q9BY64 529 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 DPH1Q9BZG8 443 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 SPRTNQ9H040 489 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-201ENST00000258962 PSME2Q9UL46 239 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 LRCH1Q9Y2L9 728 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 DTNAQ9Y4J8 743 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 B3GALT1Q9Y5Z6 326 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 AHCTF1Q8WYP5 2266 aa16.37■□□□□ 0.21
SRSF1-201ENST00000258962 A0A0A6YYC8 382 aaPredicted RBP16.36■□□□□ 0.21
SRSF1-201ENST00000258962 FITM1A5D6W6 292 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 FAM227AF5H4B4 570 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 I3L1I5 382 aaPredicted RBP16.36■□□□□ 0.21
SRSF1-201ENST00000258962 FASP25445 335 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 RAB38P57729 211 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 DSTNP60981 165 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 CHRNB3Q05901 458 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 RBBP4Q09028 425 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 IL11RAQ14626 422 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 LTB4RQ15722 352 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 GPR19Q15760 415 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 OR4N5Q8IXE1 308 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 EID3Q8N140 333 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 ANKFN1Q8N957 763 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 OR9A2Q8NGT5 310 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 NFKBIDQ8NI38 313 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 SFXN5Q8TD22 340 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 OR6C1Q96RD1 312 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 CTRCQ99895 268 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 YY1AP1Q9H869 796 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 FOXJ2Q9P0K8 574 aa16.36■□□□□ 0.21
SRSF1-201ENST00000258962 CNOT11Q9UKZ1 510 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms