RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 LEFTY2O00292 366 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 RNASET2O00584 256 aaKnown RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 PDPK1O15530 556 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 MMP20O60882 483 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF821O75541 412 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 POP7O75817 140 aaKnown RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 POLR2EP19388 210 aaKnown RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ELAVL4P26378 380 aaKnown RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 WASP42768 502 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 CRYBB2P43320 205 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SLC3A1Q07837 685 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 GPR19Q15760 415 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 LY6G5CQ5SRR4 150 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 FAM27D1Q5T7N8 215 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 FAM205BPQ63HN1 556 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 MZT2BQ6NZ67 158 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SLCO4C1Q6ZQN7 724 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SLC5A11Q8WWX8 675 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SMG7Q92540 1137 aaKnown RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 PPIL3Q9H2H8 161 aaKnown RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 DMRT3Q9NQL9 472 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 PLCXD1Q9NUJ7 323 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 A0A1W2PQ45 241 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 A0A1W2PQY0 241 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF670-ZNF695F2Z2N8 137 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 INMT-MINDY4F8WBC2 141 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 I3L521 148 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 FKTNO75072 461 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 INHAP05111 366 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 RB1P06400 928 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 C1GALT1C1LP0DN25 315 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 NPPBP16860 134 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ALAS2P22557 587 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 PPM1FP49593 454 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SMSP52788 366 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 COX10Q12887 443 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 CDKN3Q16667 212 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 GGTA1PQ4G0N0 100 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 C9orf64Q5T6V5 341 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 LINC00299Q6ZSB3 139 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SYT9Q86SS6 491 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 OR52I1Q8NGK6 324 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 OR4C15Q8NGM1 316 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 CHTF18Q8WVB6 975 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 TM9SF4Q92544 642 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 GLYATL1Q969I3 302 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 IGSF21Q96ID5 467 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 HHIPL1Q96JK4 782 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SNX18Q96RF0 628 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 PLA2G12AQ9BZM1 189 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 CWH43Q9H720 699 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 MED20Q9H944 212 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SLAMF7Q9NQ25 335 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 TEX10Q9NXF1 929 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 STMN3Q9NZ72 180 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ENOPH1Q9UHY7 261 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 PTPRDP23468 1912 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 ERVH48-1M5A8F1 160 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 GNB5O14775 395 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 EEF1E1O43324 174 aaKnown RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 MPZL2O60487 215 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 CRYZL1O95825 349 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 PAHP00439 452 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 HOXB6P17509 224 aaKnown RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 SLC9A3P48764 834 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 SRP9P49458 86 aaKnown RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 MVDP53602 400 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 CDH11P55287 796 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 CLDN2P57739 230 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 RPL6Q02878 288 aaKnown RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 FAM209AQ5JX71 171 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 DCLRE1CQ96SD1 692 aaKnown RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 ZNF607Q96SK3 696 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 TREX2Q9BQ50 279 aaPredicted RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 SAP130Q9H0E3 1048 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 MIXL1Q9H2W2 232 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 OR51I1Q9H343 314 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 RC3H2Q9HBD1 1191 aaKnown RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 TAAR2Q9P1P5 351 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 HCN2Q9UL51 889 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 MAPRE3Q9UPY8 281 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 FAM170BA6NMN3 283 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 A8MUA0 341 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 SLC2A10O95528 541 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 RAB36O95755 333 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 CYP2A6P11509 494 aaPredicted RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 TYRP14679 529 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 DRD5P21918 477 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 MMP11P24347 488 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 GIPRP48546 466 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 NCBP2P52298 156 aaKnown RBP eCLIP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 FABP5Q01469 135 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 HYAL2Q12891 473 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 ZNF267Q14586 743 aaPredicted RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 SLC8B1Q6J4K2 584 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms