RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CD8BP10966 210 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 MAPK8P45983 427 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 LIM2P55344 173 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 DCDC1P59894 354 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 ZNF385BQ569K4 471 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 LAPTM4BQ86VI4 370 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 FAM9CQ8IZT9 166 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 L3MBTL4Q8NA19 623 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 HUS1BQ8NHY5 278 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 CIDECQ96AQ7 238 aaPredicted RBP13.36□□□□□ -0.27
SF1-201ENST00000227503 ASIC4Q96FT7 647 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 PIP5K1AQ99755 562 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 ATF6BQ99941 703 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 WFDC6Q9BQY6 131 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 TRBC2A0A5B9 178 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 OR10H3O60404 316 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 AOAHP28039 575 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 PCGF2P35227 344 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 BDKRB1P46663 353 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 RPS26P62854 115 aaKnown RBP13.35□□□□□ -0.27
SF1-201ENST00000227503 PCDH1Q08174 1060 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 RFLNAQ6ZTI6 216 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 DNAJB7Q7Z6W7 309 aaPredicted RBP13.35□□□□□ -0.27
SF1-201ENST00000227503 LHFPL3Q86UP9 236 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 MS4A15Q8N5U1 240 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 OR52H1Q8NGJ2 320 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 AP2M1Q96CW1 435 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 MAPKAP1Q9BPZ7 522 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 ABCG5Q9H222 651 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 PIGUQ9H490 435 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 RECKO95980 971 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 ACSM4P0C7M7 580 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 OR12D1P0DN82 309 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 GJA1P17302 382 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 ELK1P19419 428 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 XCR1P46094 333 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 GSTM5P46439 218 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 EVX1P49640 407 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 HBA1P69905 142 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 MC1RQ01726 317 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 CHIT1Q13231 466 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 SF3A2Q15428 464 aaKnown RBP13.35□□□□□ -0.27
SF1-201ENST00000227503 CPTPQ5TA50 214 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 FRG2Q64ET8 278 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 CASP12Q6UXS9 341 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 MSANTD1Q6ZTZ1 278 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 GPAT4Q86UL3 456 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
SF1-201ENST00000227503 ASB11Q8WXH4 323 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 HSD17B8Q92506 261 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 SORCS2Q96PQ0 1159 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 FRG2BQ96QU4 278 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.35□□□□□ -0.27
SF1-201ENST00000227503 PPA2Q9H2U2 334 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 CTPS2Q9NRF8 586 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 EXTL2Q9UBQ6 330 aa13.35□□□□□ -0.27
SF1-201ENST00000227503 ATG13O75143 517 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 RRASP10301 218 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 CD22P20273 847 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 MAPK1P28482 360 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 PTSQ03393 145 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 RIN1Q13671 783 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 KLHL12Q53G59 568 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 CRB2Q5IJ48 1285 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 USP45Q70EL2 814 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 TECPR1Q7Z6L1 1165 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 VRK3Q8IV63 474 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 C1orf52Q8N6N3 182 aaKnown RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 PROKR2Q8NFJ6 384 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 OR6M1Q8NGM8 313 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 FOXJ1Q92949 421 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 CLEC4MQ9H2X3 399 aaPredicted RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 ZNF624Q9P2J8 865 aaPredicted RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 REV1Q9UBZ9 1251 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 UBQLN2Q9UHD9 624 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 IGLV3-16A0A075B6K0 115 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 TCRBV16S1A1N1A0A5B0 115 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 SERTM1A2A2V5 107 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 HNRNPCL2B2RXH8 293 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 SAP18O00422 153 aaKnown RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 EEF1E1O43324 174 aaKnown RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 SEMA7AO75326 666 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 C6orf47O95873 294 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 LGI1O95970 557 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 HLA-DQB1P01920 261 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 POU3F2P20265 443 aaPredicted RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 XKP51811 444 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 MVDP53602 400 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 PPP3R1P63098 170 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 SRSF11Q05519 484 aaKnown RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 LMAN2Q12907 356 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 ANGPT1Q15389 498 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 RTL4Q6ZR62 310 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 NPAS3Q8IXF0 933 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 CXorf58Q96LI9 332 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 KCNJ15Q99712 375 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 RSPO3Q9BXY4 272 aaPredicted RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 PCDHGB7Q9Y5F8 929 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms