RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 DOCK4Q8N1I0 1966 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 CIB2O75838 187 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 SNX4O95219 450 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 HIST1H2ABP04908 130 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 RPS17P08708 135 aaKnown RBP4.96□□□□□ -1.62
RUFY3-201ENST00000226328 SLC6A12P48065 614 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 LIM2P55344 173 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 HIST3H2AQ7L7L0 130 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 ANKRD37Q7Z713 158 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 CYP4Z1Q86W10 505 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 CA13Q8N1Q1 262 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 METTL4Q8N3J2 472 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 CDRT4Q8N9R6 151 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 OR1J4Q8NGS1 313 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 CLHC1Q8NHS4 586 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 HIST1H2ACQ93077 130 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 FAM173AQ9BQD7 235 aa4.96□□□□□ -1.62
RUFY3-201ENST00000226328 MCTS1Q9ULC4 181 aaKnown RBP4.96□□□□□ -1.62
RUFY3-201ENST00000226328 MRPS18BQ9Y676 258 aaKnown RBP4.96□□□□□ -1.62
RUFY3-201ENST00000226328 A0A0C4DFX4 3053 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ATP6AP2A0A1C7CYW4 349 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 B8ZZF3 427 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ATP6AP2O75787 350 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 DCTN3O75935 186 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 SHBGP04278 402 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 FESP07332 822 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 CYP4B1P13584 511 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 MAOAP21397 527 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PPIAP62937 165 aaKnown RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 FOXK1P85037 733 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ZNF844Q08AG5 666 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 NFYCQ13952 458 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 SYT16Q17RD7 645 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 KCTD19Q17RG1 926 aaPredicted RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ZSWIM7Q19AV6 140 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ARTNQ5T4W7 220 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 CLEC6AQ6EIG7 209 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ARHGAP11AQ6P4F7 1023 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 BNC2Q6ZN30 1099 aaPredicted RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 GALNTL5Q7Z4T8 443 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 LGI4Q8N135 537 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PLD6Q8N2A8 252 aaKnown RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 SCAIQ8N9R8 606 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PHOSPHO1Q8TCT1 267 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 L3HYPDHQ96EM0 354 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 MAPKAP1Q9BPZ7 522 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ANKZF1Q9H8Y5 726 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 RAB21Q9UL25 225 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 NDUFAF1Q9Y375 327 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 LY6G6EA0A0G2JKS1 128 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 NR5A2O00482 541 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PIP5K1BO14986 540 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ACOX3O15254 700 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 FBXO24O75426 580 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 JRKO75564 520 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 SLC22A3O75751 556 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 F10P00742 488 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 IL2RAP01589 272 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ELAVL4P26378 380 aaKnown RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PTGS2P35354 604 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 STT3AP46977 705 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 CCT3P49368 545 aaKnown RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 NME5P56597 212 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 AGKQ53H12 422 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 EIPR1Q53HC9 387 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 NUP54Q7Z3B4 507 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 TIPARPQ7Z3E1 657 aaKnown RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 APLFQ8IW19 511 aaPredicted RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 LAS2Q8IYD9 372 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PLPP7Q8NBV4 271 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 OR52B6Q8NGF0 335 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 SPPL2AQ8TCT8 520 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 TSLPQ969D9 159 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 FBXL20Q96IG2 436 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 SLC26A1Q9H2B4 701 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 TMBIM4Q9HC24 238 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 MMP25Q9NPA2 562 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 SEMA5BQ9P283 1151 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 CAMK2AQ9UQM7 478 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PCDHA9Q9Y5H5 950 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 U3KQA8 63 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 RNF103-CHMP3A0A140T963 221 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 DVL2O14641 736 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 SCO2O43819 266 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 IL6P05231 212 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PRR35P0CG20 571 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 GP1BBP13224 206 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 CHN1P15882 459 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 GABRA3P34903 492 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 GPR143P51810 404 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 C18orf21Q32NC0 220 aaPredicted RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 PDCD4Q53EL6 469 aaKnown RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 UNC50Q53HI1 259 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 FCRLBQ6BAA4 426 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 FAM198BQ6UWH4 519 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 MISPQ8IVT2 679 aa4.95□□□□□ -1.62
RUFY3-201ENST00000226328 CENPLQ8N0S6 344 aaPredicted RBP4.95□□□□□ -1.62
RUFY3-201ENST00000226328 OR5T3Q8NGG3 340 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms